AmeyaHarmalkar / therMLLinks
The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability
☆13Updated 2 years ago
Alternatives and similar repositories for therML
Users that are interested in therML are comparing it to the libraries listed below
Sorting:
- Humanness of de-novo designed proteins☆24Updated 4 months ago
- ☆28Updated 2 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 2 years ago
- ☆20Updated 3 years ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆28Updated last year
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- ☆19Updated 10 months ago
- ☆35Updated 5 months ago
- ☆20Updated 2 years ago
- ☆28Updated 7 months ago
- Code for deep learning guided design of dynamic proteins☆29Updated last year
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆23Updated last year
- ☆26Updated last month
- ☆14Updated last year
- Metrics for our protein design competitions.☆35Updated 10 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- ☆10Updated 3 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- Modeling the effects of mutations in proteins using PyRosetta☆26Updated 7 years ago
- Explicit crosslinks in AlphaFold 3☆22Updated 6 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated last year
- ☆37Updated last month
- Efficient manipulation of protein structures in Python☆57Updated this week
- Some scripts that I keep using over and over.☆20Updated 2 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 2 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆17Updated 4 months ago
- Scoring methods for predicting the DDG upon protein mutation☆14Updated 2 years ago
- Making Protein folding accessible to all!☆23Updated last year