Alternatives and similar repositories for BioPhi

Users that are interested in BioPhi are comparing it to the libraries listed below

• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆171Updated 2 months ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆262Updated last year
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆220Updated 2 years ago
• wallnerlab / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆360Updated 3 months ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆170Updated 2 years ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆167Updated 3 years ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆115Updated 8 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆277Updated 2 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆151Updated 9 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆166Updated last year
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆261Updated last month
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆133Updated 4 years ago
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆157Updated 2 years ago
• gjoni / trDesign
  trRosetta for protein design
  ☆183Updated 4 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆131Updated 2 years ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆326Updated last year
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆221Updated this week
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆173Updated 4 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆146Updated last month
• Kortemme-Lab / flex_ddG_tutorial
  ☆141Updated 3 years ago
• uw-ipd / RoseTTAFold2
  ☆208Updated 9 months ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆224Updated 6 months ago
• ikalvet / heme_binder_diffusion
  ☆146Updated 6 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆238Updated 6 months ago
• RosettaCommons / RFantibody
  ☆432Updated last week
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆172Updated 4 months ago
• guyujun / pyrosetta-basic
  ☆181Updated 4 years ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆386Updated this week
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆173Updated 4 months ago
• varun-shanker / structural-evolution
  ☆122Updated last year