Alternatives and similar repositories for BioPhi

Users that are interested in BioPhi are comparing it to the libraries listed below

• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆159Updated 2 years ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆205Updated last year
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆287Updated 5 months ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆141Updated 4 months ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆216Updated last year
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆96Updated last month
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆260Updated 2 years ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆117Updated 2 years ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆174Updated 4 months ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆151Updated last year
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆125Updated 3 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆141Updated last month
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆142Updated last year
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆199Updated last week
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆160Updated last year
• guyujun / pyrosetta-basic
  ☆167Updated 3 years ago
• nrbennet / dl_binder_design
  ☆321Updated 10 months ago
• gjoni / trDesign
  trRosetta for protein design
  ☆179Updated 4 years ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆291Updated last year
• RosettaCommons / RFantibody
  ☆224Updated 2 months ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆113Updated last year
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆167Updated this week
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆154Updated 2 years ago
• jertubiana / ScanNet
  ☆126Updated this week
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆158Updated 3 months ago
• varun-shanker / structural-evolution
  ☆109Updated 11 months ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆135Updated 2 months ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆329Updated this week
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆311Updated 7 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆364Updated last year