Alternatives and similar repositories for ABlooper

Users that are interested in ABlooper are comparing it to the libraries listed below

• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆23Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 7 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆36Updated 2 years ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆72Updated 3 weeks ago
• KULL-Centre / _2024_cagiada_stability
  ☆72Updated 9 months ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆91Updated 6 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆80Updated 4 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆57Updated 2 weeks ago
• bjornwallner / alphafoldv2.2.0
  Open source code for AlphaFold.
  ☆38Updated 3 years ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆67Updated 4 months ago
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆21Updated 7 months ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆69Updated last year
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆83Updated last year
• CarbonMatrixLab / AbX
  Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints
  ☆44Updated 6 months ago
• bwicky / oligomer_hallucination
  ☆36Updated 2 years ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆52Updated 3 weeks ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆50Updated 2 months ago
• jproney / AF2Rank
  ☆114Updated 3 years ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆40Updated last year
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆56Updated 5 months ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆28Updated 2 years ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆80Updated 10 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆36Updated 3 years ago
• instadeepai / FrameDiPT
  FrameDiPT: an SE(3) diffusion model for protein structure inpainting
  ☆58Updated last year
• ohuelab / ColabDesign-cyclic-binder
  ☆37Updated 2 years ago
• AbSciBio / igdesign
  ☆47Updated 11 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆70Updated last year