Alternatives and similar repositories for binding-ddg-predictor

Users that are interested in binding-ddg-predictor are comparing it to the libraries listed below

• wengong-jin / abdockgen
  ☆107Updated 2 years ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆172Updated last year
• jertubiana / ScanNet
  ☆133Updated 4 months ago
• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆157Updated 3 weeks ago
• jproney / AF2Rank
  ☆114Updated 2 years ago
• wengong-jin / RefineGNN
  ☆130Updated 3 years ago
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆96Updated 6 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆119Updated 8 months ago
• Liuxg16 / GeoPPI
  ☆87Updated 3 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 4 years ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆95Updated 11 months ago
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆108Updated last year
• aws-samples / lm-gvp
  LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure
  ☆64Updated last year
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆151Updated 2 years ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆120Updated 8 months ago
• DeepGraphLearning / GearBind
  Pretrainable geometric graph neural network for antibody affinity maturation
  ☆66Updated 7 months ago
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆148Updated 2 years ago
• levinthal / Pallatom
  ☆126Updated 5 months ago
• leeyang / DRfold
  ☆42Updated 2 years ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆87Updated 5 months ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆155Updated this week
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆52Updated 4 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆90Updated 2 months ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆204Updated 3 months ago
• BytedProtein / ByProt
  ☆204Updated last year
• luwei0917 / TankBind
  Open source code for TankBind. Galixir Tenchnologies
  ☆170Updated 2 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆80Updated 2 years ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆144Updated 2 months ago
• jcchan23 / GraphSol
  Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…
  ☆76Updated 3 years ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆233Updated 3 months ago