wengong-jin / abdockgen
☆105Updated last year
Alternatives and similar repositories for abdockgen:
Users that are interested in abdockgen are comparing it to the libraries listed below
- ☆83Updated 5 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆102Updated 3 weeks ago
- Antibody-Antigen Docking and Affinity Benchmark☆70Updated 4 years ago
- ☆88Updated 4 months ago
- ☆128Updated 2 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆97Updated 5 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆58Updated last week
- Diffusion model based protein-ligand flexible docking method☆101Updated 4 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆73Updated 9 months ago
- Official repository of EnzymeFlow☆82Updated 3 months ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆83Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆47Updated 2 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆91Updated last year
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆57Updated 9 months ago
- ☆66Updated last year
- ☆178Updated 6 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆103Updated this week
- Sidechain conditioning and modeling for full-atom protein sequence design☆83Updated 3 weeks ago
- ☆35Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆67Updated 5 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆80Updated 10 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆86Updated last year
- Masif seed paper repository☆146Updated last year
- Fitness landscapes for antibodies☆66Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆57Updated last year
- ☆111Updated last week
- open source repository☆136Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆63Updated 5 months ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆47Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆50Updated 2 weeks ago