Alternatives and similar repositories for omero-figure

Users that are interested in omero-figure are comparing it to the libraries listed below

• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated last year
• NL-BioImaging / biomero
  BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster
  ☆24Updated this week
• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆46Updated last week
• mobie / mobie-viewer-fiji
  ☆41Updated last week
• ABIF-McGill / MethodsJ2
  MethodsJ2
  ☆14Updated 3 years ago
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆51Updated 2 years ago
• edamontology / edam-bioimaging
  An ontology of imaging and related techniques and technologies, image processing and analysis, image data and formats, within bio- and ot…
  ☆11Updated last month
• CellMigrationLab / CellTracksColab
  A platform for compiling, analyzing, and exploring tracking data
  ☆47Updated 3 months ago
• glencoesoftware / webinar-notebooks
  Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar
  ☆13Updated 2 years ago
• miura / reproducible_bioimage_analysis
  ☆14Updated 4 years ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆24Updated 9 months ago
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆39Updated 2 weeks ago
• biovoxxel / bv3dbox
  The known BioVoxxel Toolbox functions now improved for 2D and 3D images
  ☆17Updated 3 weeks ago
• bigdataprocessor / bigdataprocessor2
  ☆23Updated 3 months ago
• IDR / idr-notebooks
  Jupyter Notebooks for the Image Data Resource
  ☆19Updated 3 weeks ago
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆61Updated last year
• kreshuklab / go-nuclear
  Guides and code for 3D nuclear instance segmentation
  ☆22Updated 2 weeks ago
• BIOP / EasyXT-FIJI
  Commands and Classes for interfacing between Imaris and Fiji
  ☆13Updated last year
• NHPatterson / napari-wsireg
  Whole slide image registration through wsireg in napari.
  ☆12Updated 2 years ago
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated 3 weeks ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 4 years ago
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆47Updated last week
• ome / docker-example-omero
  OMERO Docker compose example
  ☆28Updated last week
• aafkegros / Blender_for_Biologists_2023
  ☆39Updated last year
• fmicompbio / ez_zarr
  GIve easy, high-level access to ome-zarr fileset
  ☆22Updated 2 months ago
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆39Updated 2 months ago
• GloBIAS-BioimageAnalysts / GloBIAS_Training_School_2025_Kobe_Japan
  Program and links to the material for the GloBIAS Training School 2025, Kobe, Japan.
  ☆22Updated last month
• BioImageTools / ome-zarr-image-analysis-nextflow
  Basic example of using OME-Zarr in a Nextflow pipeline
  ☆19Updated 5 months ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆18Updated 2 years ago