ome / docker-example-omeroLinks
OMERO Docker compose example
☆28Updated 4 months ago
Alternatives and similar repositories for docker-example-omero
Users that are interested in docker-example-omero are comparing it to the libraries listed below
Sorting:
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated last week
- An OMERO.web app for creating Figures from images in OMERO☆17Updated 2 weeks ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Jupyter Notebooks for the Image Data Resource☆18Updated last week
- An introduction to bioimage analysis - http://bioimagebook.github.io☆73Updated 2 months ago
- StarDist plugin for napari☆39Updated last year
- OMERO.server production docker image☆16Updated 2 weeks ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 6 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated 2 years ago
- A browser-based deep learning tool for image annotation, segmentation, classification, and measurement.☆36Updated last month
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated last week
- ☆39Updated this week
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated 11 months ago
- Read and write life sciences file formats☆142Updated 4 months ago
- Tools for distributed alignment of massive images☆88Updated last month
- Curated metadata for all studies published in the Image Data Resource☆16Updated 3 months ago
- Easily read and write ome-tiff images in python☆28Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆59Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- CytoData 2016 – origin story☆18Updated 8 years ago
- Multiple file format reading directly into napari using pure Python☆39Updated 3 weeks ago
- Lectures for a napari training course☆51Updated 2 years ago
- Bio-Formats image file format to raw format converter☆101Updated last month
- ☆20Updated 4 years ago
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆98Updated 2 years ago
- Raw format to OME-TIFF converter☆56Updated last month
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆220Updated 9 months ago