Alternatives and similar repositories for webinar-notebooks:

Users that are interested in webinar-notebooks are comparing it to the libraries listed below

• IDR / idr-metadata
  Curated metadata for all studies published in the Image Data Resource
  ☆14Updated last month
• ome / omero-figure
  An OMERO.web app for creating Figures from images in OMERO
  ☆16Updated 2 weeks ago
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 3 years ago
• ome / omero-cli-transfer
  An OMERO CLI plugin for creating transfer packets between OMERO servers.
  ☆17Updated 2 months ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated 6 months ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆37Updated 5 months ago
• mobie / mobie-viewer-fiji
  ☆35Updated this week
• manzt / napari-lazy-openslide
  Lazily load multiscale whole-slide images with openslide and dask
  ☆33Updated 2 years ago
• bigdataprocessor / bigdataprocessor2
  ☆20Updated 3 weeks ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆26Updated 9 months ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated this week
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆35Updated last week
• guiwitz / napari_demo
  ☆22Updated 3 years ago
• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆41Updated 3 months ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆16Updated last week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆32Updated last week
• glencoesoftware / raw2ometiff
  Raw format to OME-TIFF converter
  ☆49Updated last week
• Kapoorlabs-CAPED / NapaTrackMater
  Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.
  ☆16Updated 2 months ago
• miura / ij_textbook2
  CMCI textbook 2, for ImageJ macro course
  ☆18Updated 7 years ago
• miura / NEUBIAS_AnalystSchool2020
  ☆13Updated 4 years ago
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆55Updated 2 weeks ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated last year
• ksugar / qupath-extension-cellsparse
  QuPath extension for Cellsparse
  ☆18Updated 2 months ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆20Updated last month
• BIOP / EasyXT-FIJI
  Commands and Classes for interfacing between Imaris and Fiji
  ☆12Updated 4 months ago
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated last year
• ome / omero-py
  Python project containing Ice remoting code for OMERO
  ☆24Updated last month
• MIAnalyzer / MIA
  Microsopic Image Analyzer (MIA)
  ☆29Updated 10 months ago
• ABIF-McGill / MethodsJ2
  MethodsJ2
  ☆14Updated 2 years ago