Alternatives and similar repositories for webinar-notebooks

Users that are interested in webinar-notebooks are comparing it to the libraries listed below

• bigdataprocessor / bigdataprocessor2
  ☆22Updated 3 weeks ago
• IDR / idr-metadata
  Curated metadata for all studies published in the Image Data Resource
  ☆15Updated 3 weeks ago
• ome / omero-figure
  An OMERO.web app for creating Figures from images in OMERO
  ☆17Updated last month
• miura / reproducible_bioimage_analysis
  ☆14Updated 4 years ago
• mobie / mobie-viewer-fiji
  ☆37Updated this week
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆60Updated 2 weeks ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated last month
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆24Updated 5 months ago
• 4DNucleome / PartSeg
  Tool for segmentation in bioimaging
  ☆35Updated this week
• guiwitz / napari_demo
  ☆22Updated 4 years ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 11 months ago
• quantumjot / CellTracking
  Cell tracking using TensorFlow and BayesianTracker
  ☆22Updated 3 years ago
• miura / ij_textbook2
  CMCI textbook 2, for ImageJ macro course
  ☆18Updated 7 years ago
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆44Updated 3 months ago
• imjoy-team / kaibu
  Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.
  ☆35Updated 4 months ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆27Updated last year
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated 2 weeks ago
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆26Updated this week
• manzt / napari-lazy-openslide
  Lazily load multiscale whole-slide images with openslide and dask
  ☆33Updated 2 years ago
• ome / omero-cli-transfer
  An OMERO CLI plugin for creating transfer packets between OMERO servers.
  ☆17Updated last month
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated this week
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆46Updated this week
• stardist / stardist-napari
  StarDist plugin for napari
  ☆39Updated last year
• glencoesoftware / NGFF-Converter
  NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF
  ☆29Updated last year
• glencoesoftware / bioformats2raw
  Bio-Formats image file format to raw format converter
  ☆96Updated this week
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆28Updated last month
• clij / clij
  CLIJ is deprecated. Visit CLIJ2
  ☆56Updated 4 years ago
• CellProfiler / python-bioformats
  Read and write life sciences file formats
  ☆140Updated 2 months ago