hadim / docker-omeroLinks
Set of Dockerfile to build a ready-to-use OMERO server
☆15Updated 8 years ago
Alternatives and similar repositories for docker-omero
Users that are interested in docker-omero are comparing it to the libraries listed below
Sorting:
- AICS Segmentation (One-Way) Mirror☆45Updated 5 years ago
- ☆41Updated last week
- OMERO Docker compose example☆29Updated 3 weeks ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆220Updated 3 weeks ago
- Tools for distributed alignment of massive images☆90Updated last week
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated last month
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- ☆39Updated last year
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Create 3D/4D animations using a natural language-based syntax☆61Updated 6 months ago
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated last year
- A browser-based deep learning tool for image annotation, segmentation, classification, and measurement.☆38Updated 3 weeks ago
- A napari plugin for clustering objects according to their properties.☆88Updated last week
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 8 months ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Updated last week
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated 2 years ago
- CytoData 2016 – origin story☆18Updated 8 years ago
- Manual, source-code and binaries for the NanoJ-Fluidics project☆51Updated 3 years ago
- Read and write life sciences file formats☆142Updated 6 months ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆160Updated 4 months ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Updated 8 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- Bio-Formats image file format to raw format converter☆102Updated last week
- Tool for precise, interactive, fast and scalable FISH spot detection☆50Updated 10 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 8 months ago
- Advanced Tool for Labeling And Segmentation☆39Updated last year
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 3 weeks ago
- ☆13Updated 5 years ago