netZooR is a network biology package implemented in R.
☆119Mar 23, 2026Updated last month
Alternatives and similar repositories for netZooR
Users that are interested in netZooR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- netZooM is a network biology package implemented in MATLAB.☆29Apr 16, 2025Updated last year
- netZooC is a network biology package implemented in C.☆26Feb 27, 2026Updated 2 months ago
- netZooPy is a network biology package implemented in Python.☆96Apr 30, 2026Updated last week
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆45Oct 20, 2025Updated 6 months ago
- YARN: Robust Multi-Tissue RNA-Seq Preprocessing and Normalization☆13Mar 4, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆11Aug 21, 2024Updated last year
- ☆12Mar 18, 2026Updated last month
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16May 16, 2023Updated 2 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆27Sep 20, 2022Updated 3 years ago
- PHOENIX: a tool to infer biologically informed NeuralODEs describing genome-wide regulatory dynamics☆20May 8, 2024Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆69Mar 17, 2026Updated last month
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆18Jul 14, 2023Updated 2 years ago
- Python implementation of the BRIM algorithm for bipartite community structure detection.☆12Aug 11, 2022Updated 3 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆16Jan 21, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Nov 5, 2022Updated 3 years ago
- An R package for time course sequencing data analysis☆21May 8, 2023Updated 2 years ago
- ☆11Oct 20, 2024Updated last year
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆45Sep 20, 2024Updated last year
- The blog of tidyomics☆14Jul 12, 2025Updated 9 months ago
- Tools for analyzing data on the image from NanoString GeoMx Digital Spatial Profiler (DSP).☆24Sep 29, 2025Updated 7 months ago
- R package IReNA☆30Nov 13, 2024Updated last year
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Jul 3, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆14Nov 29, 2025Updated 5 months ago
- BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequenc…☆32May 20, 2025Updated 11 months ago
- In-depth analysis of normalization and transformation methods for building coexpression networks from RNA-seq data.☆15Aug 4, 2023Updated 2 years ago
- R package to do the Ligand Receptor Analysis Visualization☆49Apr 30, 2026Updated last week
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆31Dec 3, 2024Updated last year
- R package to infer biological activities from omics data using a collection of methods.☆293Dec 16, 2025Updated 4 months ago
- Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)☆30May 16, 2025Updated 11 months ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Recurrent Variational Auto gene encoder☆19Jan 12, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Random network generator☆19Jan 4, 2017Updated 9 years ago
- ☆36Apr 24, 2026Updated 2 weeks ago
- Software to infer latent pleiotropic components from GWAS summary data☆16Jan 30, 2025Updated last year
- Data-driven signal detection for unbiased scRNA-seq data analysis☆23Jan 22, 2026Updated 3 months ago
- Holds the code and data to reproduce the analyses of Danaher & Kim et a;, "Advances in mixed cell deconvolution enable quantification of …☆12Dec 8, 2021Updated 4 years ago
- Python Client Library for the G2P Portal API☆15Aug 14, 2025Updated 8 months ago
- ☆12Oct 23, 2023Updated 2 years ago