netZoo / netZooCLinks
netZooC is a network biology package implemented in C.
☆26Updated 8 months ago
Alternatives and similar repositories for netZooC
Users that are interested in netZooC are comparing it to the libraries listed below
Sorting:
- netZooM is a network biology package implemented in MATLAB.☆29Updated 9 months ago
- netZooR is a network biology package implemented in R.☆117Updated 3 weeks ago
- R package to access DoRothEA's regulons☆155Updated last year
- Bench-marking classification tools for scRNA-seq data☆193Updated 3 years ago
- Python package to perform enrichment analysis from omics data.☆254Updated this week
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆114Updated last year
- Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.☆149Updated 3 years ago
- single cell Flux Estimation Analysis (scFEA) Try the below web server!☆143Updated 2 years ago
- An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.☆169Updated 2 years ago
- SingleCellNet: classify single cells across species and platforms☆140Updated 2 years ago
- Tabula Muris Senis☆108Updated 2 years ago
- LIANA: a LIgand-receptor ANalysis frAmework☆230Updated last year
- R package for the joint analysis of multiple single-cell RNA-seq datasets☆218Updated last year
- Differential expression analysis for single-cell RNA-seq data.☆206Updated 3 months ago
- SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data☆179Updated 10 months ago
- A Bayesian model for compositional single-cell data analysis☆188Updated 3 weeks ago
- Detect doublets in single-cell RNA-seq data☆162Updated 5 years ago
- Batch balanced KNN☆177Updated 2 years ago
- Clonotype Neighbor Graph Analysis☆95Updated 5 months ago
- chromatin Variability Across Regions (of the genome!)☆185Updated last year
- RNA velocity estimation in Python☆175Updated 4 months ago
- netZooPy is a network biology package implemented in Python.☆94Updated last month
- Simple simulation of single-cell RNA sequencing data☆234Updated 3 weeks ago
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆96Updated 5 years ago
- Automated, probabilistic assignment of cell types in scRNA-seq data☆210Updated 3 years ago
- Tools for single-cell data processing☆132Updated last year
- Code and annotations for the Tabula Muris single-cell transcriptomic dataset.☆197Updated 2 years ago
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package☆124Updated this week
- Benchmarking computational single cell ATAC-seq methods☆184Updated 5 years ago
- Multiome GRN inference.☆135Updated last year