BioEasy / EasyCodeMLLinks
EasyCodeML: A visual tool for analysis of selection using CodeML
☆81Updated 2 years ago
Alternatives and similar repositories for EasyCodeML
Users that are interested in EasyCodeML are comparing it to the libraries listed below
Sorting:
- NLR-Annotator upload☆66Updated last year
- A set of functions to visualise genotypes based on a VCF☆86Updated 3 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆68Updated 8 months ago
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆116Updated 4 years ago
- Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data☆115Updated last year
- Automatically exported from code.google.com/p/jmodeltest2☆79Updated 3 years ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆104Updated last year
- a bash pipeline for RAD sequencing☆55Updated 4 months ago
- Version 5 of the CAFE phylogenetics software☆133Updated 3 months ago
- ☆79Updated 10 months ago
- MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes☆124Updated 7 months ago
- A library for running k-mers based GWAS☆109Updated 7 months ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆87Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 4 years ago
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- Reference-free profiling of polyploid genomes☆116Updated 10 months ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆52Updated 4 months ago
- Development version of Easyfig☆97Updated last year
- ☆71Updated last year
- Synteny Imager☆62Updated 9 months ago
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 8 months ago
- A pipeline used to identify different modes of duplicated gene pairs☆102Updated 2 months ago
- ☆26Updated 2 months ago
- ☆86Updated 3 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆96Updated 3 weeks ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated last year
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆99Updated 3 weeks ago
- Generate an interactive dot plot from mummer or minimap alignments☆202Updated last year
- paml documentation and tutorials☆56Updated 2 weeks ago
- Best practices and workflow for genome annotation☆77Updated last month