Repository to propose and discuss lineages
☆54Aug 13, 2026Updated 2 weeks ago
Alternatives and similar repositories for lineage-proposals
Users that are interested in lineage-proposals are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Aug 18, 2024Updated 2 years ago
- Informal summaries of notable SARS-CoV-2 lineages☆111Jun 1, 2026Updated 2 months ago
- Repository for suggesting new lineages that should be added to the current scheme☆1,076Updated this week
- Official place for proposals and details around monkeypox virus lineage designations☆23Jul 7, 2026Updated last month
- Results from a model of global SARS-CoV-2 lineage competition☆40Dec 17, 2025Updated 8 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- This is a repository for development of the SARS-CoV-2 Bioinformatics for Beginners Course☆11Jul 5, 2024Updated 2 years ago
- Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain☆18Nov 24, 2025Updated 9 months ago
- Projects on COVID-19 topic of genomic sequencing - mostly DataViz☆58Updated this week
- A web platform to detect and analyze variants of SARS-CoV-2☆61Updated this week
- ☆51Mar 11, 2022Updated 4 years ago
- Reproducible workflow for SARS-CoV-2 recombinant sequence detection.☆18May 15, 2023Updated 3 years ago
- Tools for analyzing and comparing SARS-CoV-2 phylogenies☆10Nov 21, 2020Updated 5 years ago
- The Whole Genome Sequencing Coverage Plot (wgscovplot) is a tool to generate HTML Interactive Coverage Plot given coverage depth informat…☆19May 3, 2024Updated 2 years ago
- Rapidly extract reads from FASTX files based on taxonomic classification via Kraken2.☆15Jun 17, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated last year
- Programmatically interact with the GISAID database.☆83Aug 5, 2025Updated last year
- The purpose of SaviR is to collect the functions needed to access and prepare various COVID data sources.☆20Apr 24, 2026Updated 4 months ago
- R Package to query CDC PLACES API Data☆17Jul 13, 2026Updated last month
- Ultrafast Sample Placement on Existing Trees☆140Jun 1, 2026Updated 2 months ago
- ☆10Jul 10, 2019Updated 7 years ago
- ☆22Jul 25, 2026Updated last month
- ☆23Jul 22, 2026Updated last month
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Sep 1, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repository for storing latest model, protobuf, designation hash and alias files for pangolin assignments☆33Aug 17, 2026Updated last week
- RSV-A lineage definitions and proposals☆16Nov 9, 2025Updated 9 months ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- SARS-Cov-2 Recombinant Finder for fasta sequences☆50Jun 22, 2022Updated 4 years ago
- Bioinformatics pipeline used in the Laboratory of Viral Metagenomics (KU Leuven) to trim and assemble paired-end Illumina reads, and clas…☆10Nov 6, 2025Updated 9 months ago
- SARS-CoV-2 genome data analysis☆10Dec 6, 2025Updated 8 months ago
- Estimate growth rate advantage of SARS-CoV2 variants of concern based on international genomic surveillance data and multinomial spline f…☆25Apr 24, 2023Updated 3 years ago
- Software package for assigning SARS-CoV-2 genome sequences to global lineages.☆455Aug 17, 2026Updated last week
- ☆14Oct 20, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pyro models of SARS-CoV-2 variants☆80Jul 26, 2024Updated 2 years ago
- 植物大战僵尸修改器,用WPF重制界面☆18Oct 13, 2019Updated 6 years ago
- Find and Download WorldPop rasters through QGIS☆12Sep 5, 2025Updated 11 months ago
- Stata module to access World Bank’s Global Poverty and Inequality data☆13Mar 31, 2026Updated 4 months ago
- ☆16May 12, 2023Updated 3 years ago
- International SARS-CoV-2 surveillance☆39May 19, 2023Updated 3 years ago
- A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV…☆37Aug 5, 2026Updated 3 weeks ago