nedialkova-lab / mim-tRNAseqLinks
Modification-induced misincorporation tRNA sequencing
☆24Updated last month
Alternatives and similar repositories for mim-tRNAseq
Users that are interested in mim-tRNAseq are comparing it to the libraries listed below
Sorting:
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 9 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 10 months ago
- ☆60Updated 5 months ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 2 months ago
- A list of alternative splicing analysis resources☆46Updated 8 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 5 months ago
- ☆50Updated 4 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆82Updated 4 years ago
- Bioinformatics one-liner for 100 days☆49Updated last year
- Quantification of transposable element expression using RNA-seq☆76Updated last year
- New version of JACUSA -> 2.0☆30Updated 3 weeks ago
- RNA editing quantification in deep transcriptome data☆16Updated 5 months ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 5 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆99Updated 2 weeks ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆50Updated 2 years ago
- Notes on ChIP-seq and other-seq-related tools☆26Updated 5 months ago
- A continually expanding collection of RNA-seq tools☆53Updated 2 months ago
- Analysis pipeline for the GUIDE-seq assay.☆29Updated 4 months ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- SingleCell Nanopore sequencing data analysis☆62Updated 6 months ago
- circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data☆59Updated last month
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- ☆27Updated 2 years ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆70Updated 2 weeks ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- An easy-to-use Hi-C data processing software supporting distributed computation.☆62Updated last year
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆29Updated last year
- ☆15Updated 3 years ago