crazyhottommy / oneliner_100day_challengeLinks
Bioinformatics one-liner for 100 days
☆49Updated last year
Alternatives and similar repositories for oneliner_100day_challenge
Users that are interested in oneliner_100day_challenge are comparing it to the libraries listed below
Sorting:
- ☆27Updated 2 years ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 6 months ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- My youtube programming scripts☆57Updated 7 months ago
- NBIS/Elixir course: Tools for Reproducible Research☆64Updated last week
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Estimation of Promoter Activity from RNA-Seq data☆53Updated last month
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆81Updated this week
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆117Updated 6 months ago
- An R interface to the MEME Suite☆52Updated 2 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆67Updated 3 weeks ago
- ☆83Updated 8 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆79Updated 3 years ago
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 8 months ago
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆15Updated 11 months ago
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆28Updated last year
- Quantification of transposable element expression using RNA-seq☆74Updated last year
- Notes on ChIP-seq and other-seq-related tools☆26Updated last month
- A small-RNA sequencing analysis pipeline☆89Updated 2 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 6 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 5 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- ☆50Updated 4 years ago
- ☆55Updated last week
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 10 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 7 months ago