ncbi / ncbi-cxx-toolkit-public
NCBI C++ Toolkit package sources
☆67Updated this week
Alternatives and similar repositories for ncbi-cxx-toolkit-public:
Users that are interested in ncbi-cxx-toolkit-public are comparing it to the libraries listed below
- GCLib - Genomic C++ library of reusable code for bioinformatics projects☆33Updated 2 months ago
- Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation☆108Updated this week
- MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)☆26Updated 3 years ago
- Structural variant detection and association testing☆106Updated 2 years ago
- The modern argument parser for c++ tools☆11Updated last week
- Project Manager for NGS data analysis☆30Updated 2 years ago
- A fast approximate aligner for long DNA sequences☆280Updated 5 months ago
- Fast HLA type inference from whole-genome data☆135Updated 3 months ago
- BioC++ core library (alphabet, meta, ranges)☆19Updated last year
- ☆106Updated last week
- ☆36Updated last week
- The BioPerl Web site: http://bioperl.org☆14Updated 5 years ago
- A fast multiple sequence alignment program.☆137Updated 11 months ago
- Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs☆209Updated 11 months ago
- ClairS - a deep-learning method for long-read somatic small variant calling☆82Updated last month
- memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping☆58Updated last week
- A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.☆52Updated last week
- dbVar☆41Updated 2 years ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆215Updated last year
- The Ensembl Compara Perl API and SQL schema☆52Updated this week
- Utilities for building and managing bioconda recipes☆99Updated last week
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆144Updated 2 weeks ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆156Updated 11 months ago
- Simple Job Manager☆58Updated 7 years ago
- ☆109Updated 3 weeks ago
- The Ensembl Core Perl API and SQL schema☆81Updated last month
- A compressed, associative, exact, and weighted dictionary for k-mers.☆84Updated 5 months ago
- PacBio BAM C++ library☆21Updated last year
- utilities for indexing and sequence extraction from FASTA files☆59Updated 3 years ago
- Variant calling tool for long-read sequencing data☆106Updated last week