scDissector is an exploratory data analysis tool for clustered single-cell RNA-seq data. The tool has been developed and implemented as R shiny app by Ephraim (Effi) Kenigsberg
☆20Jul 21, 2023Updated 3 years ago
Alternatives and similar repositories for scDissector
Users that are interested in scDissector are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts and data files used to generate the figures of the Crohn's single-cell RNA-seq paper "Single-cell analysis of Crohn’s disease les…☆19Aug 29, 2019Updated 7 years ago
- Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.☆15Jul 16, 2023Updated 3 years ago
- ☆10Nov 5, 2023Updated 2 years ago
- CALISTA: Clustering And Lineage Inference in Single Cell Transcriptional Analysis☆10May 16, 2019Updated 7 years ago
- R package to visualize scRNA sequencing data.☆21Feb 4, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Visualization tool for integrating single cell phylogeny with genomic content to clearly display evolutionary progression and tumour hete…☆11Sep 12, 2017Updated 9 years ago
- R package for the analysis of single cell virology growth curves☆10Jan 31, 2023Updated 3 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- R Package for phasing of single cell Strand-seq data☆11Jan 14, 2025Updated last year
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆25Jul 11, 2021Updated 5 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Post hoc cell type classification of single-cell RNA-sequencing data.☆11Oct 5, 2021Updated 5 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆12Mar 10, 2022Updated 4 years ago
- This repository contains scripts used for analysis and figure generation in Maier, B., Leader, A.M., Chen, S.T. et al. A conserved dendri…☆16May 19, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- MASC: Mixed-effects Association testing for Single Cells☆16Apr 16, 2021Updated 5 years ago
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 3 years ago
- A collection of tumour microenvironment single-cell RNA sequencing datasets for use in R and other pipelines.☆21Jul 28, 2025Updated last year
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 5 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆14Aug 22, 2017Updated 9 years ago
- FastCAR is an R package for Fast Correction of Ambient RNA in droplet based single cell sequencing data☆12Oct 14, 2026Updated 2 weeks ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- R package with motifs for use with chromVAR☆29Nov 17, 2017Updated 8 years ago
- R package for analysis of single-cell data using graphs☆11Jun 8, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- co-expressed gene-set enrichment analysis☆13Nov 20, 2023Updated 2 years ago
- R package for interactive visualization and analysis of single-cell data☆11Feb 21, 2022Updated 4 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- Classification of Single cells by Transfer Learning☆12Oct 11, 2025Updated last year
- R package for bcbio single-cell RNA-seq analysis.☆31Sep 9, 2024Updated 2 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆58Jun 29, 2023Updated 3 years ago
- R package that makes linux environment modules available from R☆11Jan 13, 2023Updated 3 years ago
- Identify cell type based on cell markers for single cell squencing☆12Jul 10, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- R package for Bioconductor submission☆41Dec 8, 2022Updated 3 years ago
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆16Apr 15, 2025Updated last year
- Version 2.1.0 released☆23Sep 16, 2019Updated 7 years ago
- IKAP - Identifying K mAjor cell Population groups in single-cell RNA-seq analysis☆19Mar 16, 2020Updated 6 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feature selection algorithm for cell type identification in s…☆12May 26, 2021Updated 5 years ago
- R package for single-cell RNA-sequencing analysis☆17Sep 30, 2025Updated last year