Alternatives and similar repositories for rna-seq-example

Users that are interested in rna-seq-example are comparing it to the libraries listed below

• jmzeng1314 / bioinformatics_links
  ☆10Updated 8 years ago
• jmzeng1314 / ChIP-seq-analysis
  ChIP-seq analysis notes from Tommy Tang
  ☆19Updated 8 years ago
• jmzeng1314 / my-perl
  some short but practical PERL script in NGS data analysis
  ☆16Updated 7 years ago
• jmzeng1314 / cnv
  ☆32Updated 7 years ago
• jmzeng1314 / IRseq
  ☆10Updated 7 years ago
• jmzeng1314 / TF_map
  ☆12Updated 4 years ago
• marvin-jens / find_circ
  tools to find circRNAs in RNA-seq data
  ☆42Updated 7 years ago
• jmzeng1314 / myScRNA-seq
  ☆13Updated 7 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 5 years ago
• jmzeng1314 / survival
  ☆17Updated 5 years ago
• jmzeng1314 / IDmap
  ☆11Updated 6 years ago
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆33Updated 3 years ago
• jmzeng1314 / BPscRNAseq
  ☆11Updated 6 years ago
• menghaowei / ngstools
  My own tools code for NGS data analysis (Next Generation Sequencing)
  ☆30Updated 5 years ago
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆44Updated 4 years ago
• cit-bioinfo / mMCP-counter
  Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data
  ☆11Updated 2 years ago
• xuzhougeng / R-ChIP-data-analysis
  ☆50Updated 6 years ago
• ENCODE-DCC / dna-me-pipeline
  DCC/DAC methylation pipeline source
  ☆55Updated 4 years ago
• shunliubio / easym6A
  Process m6A/MeRIP-seq data in a single or batch job mode
  ☆20Updated 5 years ago
• jmzeng1314 / myTCGA
  It's just a personal record for studying how to analysis TCGA data(expression+mutation+methylation+CNV)
  ☆20Updated 8 years ago
• shawnzhangyx / cvdc_scripts
  scripts for analyzing the CVDC data.
  ☆18Updated 5 years ago
• compbiolabucf / AS-Quant
  Quantitation and visualization of differential alternative splicing events
  ☆10Updated 2 years ago
• markowetzlab / Drews2022_CIN_Compendium
  Main repository for Drews et al. (Nature, 2022)
  ☆40Updated last year
• ding-lab / PanCanAtlasGermline
  ☆44Updated 6 years ago
• ndbrown6 / MSK-GRAIL-TECHVAL
  High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants
  ☆22Updated 5 years ago
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• KafsackLab / scRNAseq-Malaria
  Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…
  ☆10Updated 7 years ago
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆29Updated 6 years ago
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 5 years ago
• ratschlab / pancanatlas_code_public
  Public repository containing research code for the TCGA PanCanAtlas Splicing project
  ☆41Updated 4 years ago