nanoporetech / vbz_compression
VBZ compression plugin for nanopore signal data
☆40Updated last month
Alternatives and similar repositories for vbz_compression
Users that are interested in vbz_compression are comparing it to the libraries listed below
Sorting:
- A repository for generating strobemers and evalaution☆78Updated last year
- A streaming method for mapping nanopore raw signals☆32Updated 3 years ago
- vcfdist: Accurately benchmarking phased variant calls☆80Updated 2 weeks ago
- ☆47Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- PGR-TK: Pangenome Research Tool Kit☆99Updated last year
- MONI: A Pangenomic Index for Finding MEMs☆37Updated last month
- A C++ library and utilities for manipulating the Graphical Fragment Assembly format.☆54Updated 3 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆42Updated this week
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆49Updated 2 months ago
- Pan-Genomic Matching Statistics☆52Updated last year
- Sensitive and Fast Alignment Search Tool for Long Read sequencing Data.☆41Updated 5 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 2 years ago
- Data from the Human PanGenomics Project☆60Updated 3 years ago
- ☆22Updated last month
- Variant calling tool for long-read sequencing data☆109Updated last month
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Updated last year
- Tumour-only somatic mutation calling using long reads☆26Updated 6 months ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆80Updated 3 weeks ago
- ☆61Updated 2 months ago
- C implementation of the Landau-Vishkin algorithm☆35Updated 3 years ago
- Estimating k-mer coverage histogram of genomics data☆78Updated last year
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆67Updated 2 years ago
- abPOA: an SIMD-based C library for fast partial order alignment using adaptive band☆122Updated 2 weeks ago
- Nanopore raw signal repeat detection pipeline☆45Updated 2 years ago
- Copy number caller for long read data including SNV utilization☆63Updated last month
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆49Updated last week
- ☆28Updated last month
- A tool for Racon polishing of miniasm assemblies☆74Updated 4 years ago
- ☆21Updated 3 months ago