cansyl / ECPredLinks
☆17Updated 3 years ago
Alternatives and similar repositories for ECPred
Users that are interested in ECPred are comparing it to the libraries listed below
Sorting:
- Feature map and function annotation of Proteins☆33Updated last year
- Multi-class signal peptide prediction and structure decoding model.☆96Updated 8 months ago
- DeepECtransformer☆28Updated 2 years ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆60Updated 5 years ago
- Genomic language model predicts protein co-regulation and function☆83Updated 7 months ago
- ☆12Updated 10 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆120Updated last year
- Conservation analysis of homologous proteins with Python☆12Updated 4 years ago
- A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence☆18Updated 3 years ago
- Fast protein domain structure embedding+search tool☆26Updated last month
- Detection of remote homology by comparison of protein language model representations☆56Updated 10 months ago
- Transmembrane proteins predicted through Language Model embeddings☆39Updated 3 months ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆40Updated last week
- Neural Networks for Protein Sequence Alignment☆130Updated 11 months ago
- ☆43Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- ☆30Updated 2 years ago
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- A domain parser for Alphafold models☆41Updated last year
- ☆72Updated last year
- Models, design algorithms, and other software related to Salis lab publications☆35Updated 11 months ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- snakemake pipeline for creating trees from sequence sets☆91Updated last week
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆156Updated 11 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆75Updated 3 months ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆37Updated 3 months ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆47Updated 6 years ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆28Updated last year
- Next generation sequence parameter library for proteins☆35Updated last month