Functional Associations using Variational Autoencoders
☆43Oct 12, 2026Updated 2 weeks ago
Alternatives and similar repositories for fava
Users that are interested in fava are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Imputing proteomics data using deep learning models☆35Jul 8, 2026Updated 3 months ago
- A graphical interface for sklearn classification to introduce machine learning to biologists☆14Mar 19, 2025Updated last year
- ☆24Mar 1, 2023Updated 3 years ago
- Embeddings to Network Alignment - align biological networks between two species☆10Sep 8, 2023Updated 3 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆22Jun 12, 2023Updated 3 years ago
- Fast array utilities☆15Oct 23, 2026Updated last week
- SPACE: STRING proteins as complementary embeddings☆44Oct 22, 2026Updated last week
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆14Mar 11, 2024Updated 2 years ago
- Drug response prediction☆10Sep 8, 2021Updated 5 years ago
- Galaxy container for single cell RNA-Seq tertiary analysis tools☆19Jun 26, 2025Updated last year
- Builds a knowledge graph from the [COVID-19 Open Research Dataset (CORD-19)](https://pages.semanticscholar.org/coronavirus-research) data…☆16Mar 27, 2020Updated 6 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆13Oct 23, 2024Updated 2 years ago
- Single-cell perturbation analysis☆355Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated 2 years ago
- ☆14Aug 10, 2026Updated 2 months ago
- ClusterScan, search for clusters of features in a given annotation.☆10Aug 26, 2021Updated 5 years ago
- Interactive 3D visualization of networks with multiple layers☆39Oct 23, 2026Updated last week
- Detect hierarchical structures in cell-cell communications☆19Jan 26, 2025Updated last year
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- ☆30Oct 4, 2024Updated 2 years ago
- Non-parametric density inference for single-cell analysis.☆77Sep 24, 2026Updated last month
- ☆17Sep 27, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python package to perform enrichment analysis from omics data.☆301Updated this week
- Provide programmatic access to the tonsil cell atlas datasets☆10Oct 22, 2026Updated last week
- ☆48Jul 24, 2025Updated last year
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆16Apr 7, 2026Updated 6 months ago
- DistMap☆15Nov 23, 2021Updated 4 years ago
- Materials for a workshop introducing machine learning to biologists☆26Mar 20, 2025Updated last year
- Metric learning-based graph-partitioned trajectory inference from single-cell data☆11Apr 28, 2023Updated 3 years ago
- Finding gene expression states in scRNA-seq data☆58Mar 22, 2024Updated 2 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Registry for scverse ecosystem packages☆42Updated this week
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆47Oct 9, 2026Updated 3 weeks ago
- Supporting data files and code for the publication by Shilts et al.☆31Aug 28, 2022Updated 4 years ago
- Lightweight GPU-accelerated spatial operations for spatial omics, with CUDA kernels and Python APIs for point-in-polygon queries, overlap…☆14Updated this week
- Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers☆17May 7, 2018Updated 8 years ago
- Count ratio uncertainty modeling base linear regression☆16Sep 23, 2026Updated last month
- ☆13Jul 5, 2019Updated 7 years ago