Unified knowledge-driven network inference from omics data
☆106Oct 2, 2026Updated last week
Alternatives and similar repositories for corneto
Users that are interested in corneto are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…☆34Sep 17, 2026Updated 3 weeks ago
- Python package to perform enrichment analysis from omics data.☆296Oct 5, 2026Updated last week
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆164Updated this week
- ☆24Apr 30, 2025Updated last year
- Pareto Task Inference in Python☆23Oct 5, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Clinical oncology tumor board decision support system made by the Decider project.☆16Apr 22, 2026Updated 5 months ago
- LIANA+: an all-in-one framework for cell-cell communication☆319Sep 24, 2026Updated 2 weeks ago
- ☆17Dec 3, 2025Updated 10 months ago
- An AnnData-based framework for integrated proteomics analysis☆30Updated this week
- CAusal Reasoning for Network Identification with integer VALue programming in R☆62Dec 6, 2023Updated 2 years ago
- SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data☆199Aug 24, 2026Updated last month
- Gene regulatory network containing signed transcription factor-target gene interactions☆127Aug 24, 2026Updated last month
- Molecular interactions inference from single-cell multi-omics data☆33May 7, 2026Updated 5 months ago
- ☆20Sep 17, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python client for the OmniPath web service☆62Feb 19, 2026Updated 7 months ago
- Context specific and dynamic gene regulatory network reconstruction and analysis☆134Aug 3, 2026Updated 2 months ago
- Nextflow implementation of scAutoQC pipeline☆12Sep 30, 2026Updated last week
- A unifying framework for biomedical research knowledge graphs☆337Sep 29, 2026Updated last week
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆80Sep 20, 2026Updated 3 weeks ago
- Single-cell Analysis of Perturbational Effects using Machine Learning☆21Oct 9, 2025Updated last year
- ☆15Jan 24, 2024Updated 2 years ago
- factor models for omics data☆49Oct 5, 2026Updated last week
- R client for the OmniPath web service☆175Sep 30, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Gene Expression Decomposition and Integration☆21Feb 9, 2026Updated 8 months ago
- scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (e…☆39Aug 15, 2026Updated last month
- Single-cell perturbation analysis☆347Updated this week
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆20Feb 23, 2026Updated 7 months ago
- Multimodal Data (.h5mu) implementation for Python☆134Oct 5, 2026Updated last week
- Supervised Pathway DEConvolution of InTerpretable Gene ProgRAms☆206Jan 30, 2026Updated 8 months ago
- R package for metabolic enzyme enrichment anaylsis☆14Oct 24, 2025Updated 11 months ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆39Updated this week
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆36Dec 15, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- LIANA: a LIgand-receptor ANalysis frAmework☆252Aug 7, 2024Updated 2 years ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆37Apr 2, 2025Updated last year
- Multiview Intercellular SpaTial modeling framework☆74Jan 15, 2026Updated 8 months ago
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- ☆17Jul 12, 2024Updated 2 years ago
- A repository for reproducing experiments from the TxPert paper☆52Mar 25, 2026Updated 6 months ago
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆72Updated this week