Illumina / PrimateAILinks
deep residual neural network for classifying the pathogenicity of missense mutations.
☆115Updated 4 years ago
Alternatives and similar repositories for PrimateAI
Users that are interested in PrimateAI are comparing it to the libraries listed below
Sorting:
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆90Updated 3 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- ☆167Updated last week
- predicting expression effects of human genome variants ab initio from sequence☆132Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆81Updated 2 years ago
- Parsing tools for GTF (gene transfer format) files☆125Updated 11 months ago
- Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing☆173Updated 2 years ago
- Tissue-specific variant effect predictions on splicing☆43Updated 2 years ago
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆114Updated last year
- Pangolin is a deep-learning method for predicting splice site strengths.☆85Updated last year
- Deep-learning Augmented RNA-seq analysis of Transcript Splicing☆115Updated last year
- ☆59Updated 4 years ago
- code to run sei and obtain sei and sequence class predictions☆111Updated 3 years ago
- [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data☆142Updated last year
- NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection☆173Updated 4 years ago
- Simple FASTQ quality assessment using Python☆109Updated 4 years ago
- Analysis pipeline for the GUIDE-seq assay.☆29Updated 5 months ago
- Python interface to running command-line and web-based MHC binding predictors☆99Updated last year
- Tools for manipulating biological data, particularly multiple sequence alignments☆159Updated last month
- Python biomart API☆69Updated 2 years ago
- ☆72Updated 2 months ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆89Updated 4 months ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆164Updated last week
- Contains the code from "Learning the Sequence Determinants of Alternative Splicing from Millions of Random Sequences"☆34Updated 9 years ago
- ☆72Updated 2 years ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆129Updated 5 years ago
- FlashFry: The rapid CRISPR target site characterization tool☆79Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Updated 9 years ago
- Public repository for ShapeMapper 2 releases☆40Updated 3 weeks ago
- Fast and flexible ORF finder☆77Updated 4 years ago