Alternatives and similar repositories for IRLS

Users that are interested in IRLS are comparing it to the libraries listed below

• l-magnificence / Mime
  Machine learning-based integration model with elegant performance
  ☆163Updated last month
• ayueme / easyTCGA
  Make TCGA download and prepare easy!
  ☆145Updated last month
• Yelab1994 / iMLGAM
  ☆93Updated 2 months ago
• yuyang3 / pan-B
  These are scripts for pan-cacner B cells analyses.
  ☆54Updated last year
• Sijin-ZhangLab / PanMyeloid
  ☆108Updated 5 years ago
• TangFei965 / pan-NK
  These are scripts for pan-cacner NK cells analyses.
  ☆72Updated 2 years ago
• Swarbricklab-code / BrCa_cell_atlas
  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
  ☆119Updated last year
• xlucpu / MOVICS
  Multi-Omics integration and VIsualization in Cancer Subtyping
  ☆145Updated 4 years ago
• JarningGau / ProjectSVR
  A package for reference mapping and nice visualization
  ☆22Updated last year
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆52Updated 4 years ago
• jalon9358 / LianLab_CRCLM
  ☆14Updated 2 years ago
• hedyBao / HNSCC_scRNA
  ☆38Updated last year
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆43Updated last year
• jmzeng1314 / METABRIC
  ☆45Updated 6 years ago
• jmzeng1314 / gtex_BRCA
  ☆16Updated 6 years ago
• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆151Updated 4 years ago
• xjsun1221 / tinyarray
  plots function for array
  ☆97Updated last year
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆144Updated 4 months ago
• Junjie-Hu / NSCLC-immunotherapy
  ☆27Updated last year
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆86Updated last year
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆81Updated last year
• WXlab-NJMU / scrna-recom
  collected resource for scRNA-seq analysis
  ☆67Updated 2 years ago
• tjhwangxiong / TCGAplot
  A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…
  ☆119Updated 7 months ago
• Zaoqu-Liu / SurvivalML
  Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors
  ☆32Updated 7 months ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆79Updated last year
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆257Updated last month
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆69Updated 2 years ago
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆136Updated 3 months ago
• ma-jq / B
  ☆28Updated last year
• 10XGenomics / HumanColonCancer_VisiumHD
  Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…
  ☆100Updated 4 months ago