This is an older version of cytosim, a cytoskeleton simulation engine
☆29Nov 2, 2021Updated 4 years ago
Alternatives and similar repositories for cytosim-2017
Users that are interested in cytosim-2017 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Generates simulated confocal data from a ground truth signal☆11Aug 16, 2022Updated 4 years ago
- MCell Monte Carlo Simulator of Cellular Microphysiology☆39Updated this week
- 3D computational model for lipid membranes☆29Feb 17, 2025Updated last year
- An epithelium simulation library☆68Feb 4, 2026Updated 8 months ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Visualization of fluorescent protein properties with d3.js☆13Jan 18, 2017Updated 9 years ago
- Files and assembly instructions for 3D printed microscopy imaging chambers. Work done by Ben Goodnow for Single Molecule Science at UNSW…☆25Mar 7, 2025Updated last year
- An R package for the analysis and interpretation of cell migration tracks.☆15Sep 19, 2025Updated last year
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆21Jun 16, 2025Updated last year
- ☆22May 12, 2021Updated 5 years ago
- Detection of Molecules plugin for ImageJ: SMLM 2D/3D localizations, drift and chromatic aberration correction, etc☆15Nov 16, 2022Updated 3 years ago
- CMCI textbook 2, for ImageJ macro course☆19Nov 6, 2017Updated 8 years ago
- a Living ENsemble Simulator -- a lens to help you watch biophysics☆17Nov 27, 2025Updated 10 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Aug 22, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 4 years ago
- ImageJ plugin suite for image feature extraction☆11Dec 17, 2015Updated 10 years ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆14Oct 15, 2025Updated last year
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 3 years ago
- ☆13Mar 26, 2025Updated last year
- Read and write ImageJ ROI format.☆90Sep 21, 2026Updated 3 weeks ago
- All design files and scripts necessary for the construction and use of the optoPlate-96☆11Apr 28, 2022Updated 4 years ago
- Shiny App for comparison of samples☆52Dec 12, 2025Updated 10 months ago
- Super-resolution radial fluctuations (SRRF)☆29Mar 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Lab manual for the MemoLab, www.thememolab.org☆11Jun 30, 2020Updated 6 years ago
- Jupyter notebooks - A tool to write and share executable notebooks and data visualization☆10Feb 5, 2026Updated 8 months ago
- Color Extractor is a Web App that allows you to extract palettes of colors from various publicly available colormaps, as well as from you…☆10Jul 26, 2026Updated 2 months ago
- Acquire bright field images along with the super resolution data and use it to track drift in 3D with nanometer precision!☆11Jun 22, 2023Updated 3 years ago
- Physically Recurrent Neural Networks☆16Oct 9, 2026Updated last week
- Open source SMLM microscope designs☆13May 31, 2023Updated 3 years ago
- clEsperanto - GPU-accelerated image processing across languages and platforms☆11Feb 13, 2021Updated 5 years ago
- A straightforward implementation of the mapper construction by Carlsson-Memoli-Singh. I wrote a little blog post about it at http://blog.…☆15Mar 18, 2015Updated 11 years ago
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆17Jun 2, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆15Apr 16, 2026Updated 6 months ago
- Trends in scientific publishing delays☆11Aug 20, 2021Updated 5 years ago
- Spheroid models of morphogenesis for the GPU.☆46Oct 12, 2025Updated last year
- Multiplex Computational Model of Neural Dynamics☆16Aug 11, 2026Updated 2 months ago
- Software Framework for MOdelling of morphology DEvelopment of micro- and NAnostructures (MoDeNa)☆21May 11, 2022Updated 4 years ago
- ☆10Nov 29, 2024Updated last year
- R client for the bioRxiv API (https://api.biorxiv.org/)☆16May 18, 2021Updated 5 years ago