Alternatives and similar repositories for PhysiBoSSv1:

Users that are interested in PhysiBoSSv1 are comparing it to the libraries listed below

• gletort / PhysiBoSS
  Multiscale simulation of multi-cellular system
  ☆26Updated 4 years ago
• RobertGregg / CellularPotts.jl
  Link to Documentation
  ☆21Updated 5 months ago
• MathOnco / HAL
  HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs
  ☆37Updated 5 months ago
• juliendelile / MECAGEN
  Simulation platform of animal embryogenesis
  ☆20Updated 2 years ago
• mkitti / Napari.jl
  Julia package for the Napari multi-dimensional image viewer
  ☆10Updated 2 years ago
• idse / imsane
  ☆10Updated 3 years ago
• dcjones / polee
  Analyzing RNA-Seq with approximate likelihood
  ☆26Updated 4 years ago
• cellmodeller / CellModeller
  GPU-accelerated multicellular modelling framework
  ☆58Updated 9 months ago
• VeraPancaldiLab / tysserand
  Fast reconstruction of spatial networks from bioimages.
  ☆25Updated 5 months ago
• dmgatti / DOQTL
  QTL mapping for Diversity Outbred mice (and other multi-founder advanced intercrosses)
  ☆14Updated 9 months ago
• tlnagy / FCSFiles.jl
  🧫 Read Flow Cytometry Standard (FCS) files in Julia
  ☆17Updated 2 years ago
• tlnagy / OMETIFF.jl
  I/O operations for OME-TIFF files in Julia
  ☆24Updated 2 months ago
• germannp / yalla
  Spheroid models of morphogenesis for the GPU.
  ☆40Updated last year
• menchelab / BioProfiling.jl
  A flexible Julia toolkit for high-dimensional cellular profiles
  ☆13Updated last year
• bicycle1885 / CellFishing.jl
  Fast and scalable cell search tool
  ☆42Updated 5 years ago
• vianamp / MitoGraph
  Software for Quantifying Mitochondrial Content in Live Cells
  ☆25Updated 7 months ago
• CompuCell3D / CompuCell3D
  CompuCell3D public source code repository
  ☆65Updated this week
• BioJulia / GenomeGraphs.jl
  A modern genomics framework for julia
  ☆69Updated 4 years ago
• PRNicovich / SerialMultiplexer
  Liquid handling robot for in situ serial multiplexing
  ☆19Updated 7 years ago
• imagej / imagej-launcher
  The ImageJ native launcher
  ☆22Updated 3 months ago
• BioJulia / FMIndexes.jl
  FM-index for full-text search
  ☆20Updated 3 years ago
• PhysiBoSS / PhysiBoSS
  PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks
  ☆23Updated this week
• OpenMendel / OpenMendel.github.io
  The main website for the OpenMendel project.
  ☆12Updated 2 years ago
• mmkim1210 / GeneticsMakie.jl
  🧬High-performance genetics- and genomics-related data visualization using Makie.jl
  ☆83Updated last week
• scverse / Muon.jl
  Muon for Julia
  ☆27Updated 3 months ago
• clij / clij
  CLIJ is deprecated. Visit CLIJ2
  ☆56Updated 3 years ago
• alanderos91 / BioSimulator.jl
  A stochastic simulation framework in Julia.
  ☆48Updated 3 months ago
• tissue-forge / tissue-forge
  Interactive, particle-based physics, chemistry and biology modeling and simulation environment
  ☆19Updated this week
• hng / BiomolecularStructures.jl
  The BiomolecularStructures package provides several Bioinformatics-related modules for Julia.
  ☆12Updated 7 years ago
• BioJulia / GenomeBrowsers.jl
  ☆11Updated 6 years ago