sysbio-curie / PhysiBoSSv1
Multiscale simulation of multi-cellular system
☆11Updated this week
Alternatives and similar repositories for PhysiBoSSv1:
Users that are interested in PhysiBoSSv1 are comparing it to the libraries listed below
- Multiscale simulation of multi-cellular system☆26Updated 4 years ago
- Link to Documentation☆21Updated last week
- Julia package for the Napari multi-dimensional image viewer☆10Updated 2 years ago
- Simulation platform of animal embryogenesis☆20Updated 2 years ago
- Fast reconstruction of spatial networks from bioimages.☆25Updated 7 months ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 3 years ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Updated last year
- Software for Quantifying Mitochondrial Content in Live Cells☆26Updated 8 months ago
- ☆11Updated 3 years ago
- Liquid handling robot for in situ serial multiplexing☆19Updated 7 years ago
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆37Updated 6 months ago
- GPU-accelerated multicellular modelling framework☆60Updated 11 months ago
- ☆14Updated last month
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆23Updated this week
- Jupyter Notebooks for the Image Data Resource☆18Updated 2 years ago
- QTL mapping for Diversity Outbred mice (and other multi-founder advanced intercrosses)☆14Updated 11 months ago
- Manual, source-code and binaries for the NanoJ-Fluidics project☆50Updated 2 years ago
- Fast and scalable cell search tool☆43Updated 5 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated this week
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆12Updated 8 months ago
- [DEPRECATED] A package for storing morphological profiling data.☆10Updated 5 months ago
- Whole-cell modeling tutorials☆16Updated 4 years ago
- Spheroid models of morphogenesis for the GPU.☆40Updated last year
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- MCell Monte Carlo Simulator of Cellular Microphysiology☆35Updated 2 weeks ago
- CompuCell3D public source code repository☆65Updated this week
- Muon for Julia☆27Updated last week
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated 6 months ago
- 🧫 Read Flow Cytometry Standard (FCS) files in Julia☆17Updated 2 years ago
- Analyzing RNA-Seq with approximate likelihood☆26Updated 4 years ago