mcfrith / last-rnaLinks
☆49Updated 2 years ago
Alternatives and similar repositories for last-rna
Users that are interested in last-rna are comparing it to the libraries listed below
Sorting:
- UCSC Nanopore☆43Updated 5 years ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- 10x Genomics Reads Simulator☆45Updated last year
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 8 months ago
- ☆49Updated 8 months ago
- HMM-HDP models for MinION signal alignments☆46Updated 8 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 2 months ago
- PHAST☆73Updated 3 weeks ago
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆28Updated 4 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆47Updated 6 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆78Updated last year
- SV caller for nanopore data☆91Updated 5 years ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆92Updated 4 years ago
- Support Vector Structural Variation Genotyper☆58Updated 5 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆56Updated 8 years ago
- Long Reads Annotation pipeline☆72Updated 3 years ago
- Automatically optimise three of Velvet's assembly parameters.☆47Updated 2 years ago
- De novo transcriptome assembler for short reads☆63Updated 7 years ago
- Structural Variant Index☆75Updated 7 months ago
- Data from the Human PanGenomics Project☆60Updated 4 years ago
- Tools to annotate genomes using long read transcriptomics data☆46Updated 4 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆32Updated 4 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆56Updated last year
- PacBio hybrid error correction through iterative short read consensus☆61Updated 6 years ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆51Updated 4 years ago
- ☆80Updated 4 months ago
- ☆29Updated 4 years ago