Recurrent Variational Auto gene encoder
☆19Jan 12, 2023Updated 3 years ago
Alternatives and similar repositories for RVAgene
Users that are interested in RVAgene are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R and MATLAB scripts for MAGICAL☆11Jun 26, 2024Updated last year
- A custom git utility for managing file sizes in your git workflow.☆11Jan 17, 2022Updated 4 years ago
- Material for the DataLucence:Images course☆10Jun 14, 2017Updated 8 years ago
- Cell-cell communication and lineage inference for scRNA-seq data☆25May 3, 2023Updated 3 years ago
- SoptSC for single cell data analysis: unsupervised inference of clustering, cell lineage, pseudotime and cell-cell communication network …☆22Dec 12, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆20Jan 6, 2023Updated 3 years ago
- HiDeF (Hierarchical community Decoding Framework)☆15Jan 30, 2024Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- A method to predict DNA shape features considering farther flanking region.☆39Sep 25, 2024Updated last year
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆13Aug 17, 2023Updated 2 years ago
- Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.☆68Jan 3, 2023Updated 3 years ago
- ☆15Apr 8, 2026Updated 3 weeks ago
- MathIOmica is a Mathematica package for omics data analyses☆12Mar 30, 2026Updated last month
- Jupyter notebook of my autoencoder presentation☆14Jan 30, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆10Sep 20, 2022Updated 3 years ago
- A computational framework for bulk RNA-seq deconvolution☆11Dec 3, 2024Updated last year
- QSP model of immune response to COVID19☆10Aug 11, 2020Updated 5 years ago
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆22Jul 10, 2024Updated last year
- Causal inference, differential expression, and co-expression for scRNA-seq☆21Dec 19, 2025Updated 4 months ago
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆21Dec 15, 2025Updated 4 months ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Jul 15, 2025Updated 9 months ago
- ☆34Oct 4, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Geometric deep learning of protein–DNA binding specificity☆78Mar 19, 2025Updated last year
- R package IReNA☆30Nov 13, 2024Updated last year
- Universal Single-Cell Genomics Preprocessing package☆49Feb 21, 2026Updated 2 months ago
- Tejaas - a tool for discovering trans-eQTLs☆11Oct 14, 2022Updated 3 years ago
- New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community☆58Dec 3, 2025Updated 5 months ago
- Global Waddington-OT☆23Mar 25, 2025Updated last year
- An automatic deep learning algorithm for spot detection in fluorescence microscopy images.☆27Apr 6, 2026Updated 3 weeks ago
- Write great documents with markdown, then execute in the shell.☆10Sep 1, 2017Updated 8 years ago
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆27Apr 3, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Colour and fill scales for 'ggplot2' using colour spaces.☆15Apr 28, 2026Updated last week
- ☆22May 6, 2022Updated 3 years ago
- 2022 PhysiCell Hackathon and Workshop☆12Jul 29, 2022Updated 3 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆18Jul 14, 2023Updated 2 years ago
- This is the fully public version of QSP Toolbox. Please check the README file for the current version of MATLAB that is supported.☆25Dec 29, 2025Updated 4 months ago
- DrugHIVE: Structure-based drug design with a deep hierarchical generative model☆112Oct 31, 2024Updated last year
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago