Recurrent Variational Auto gene encoder
☆19Jan 12, 2023Updated 3 years ago
Alternatives and similar repositories for RVAgene
Users that are interested in RVAgene are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R and MATLAB scripts for MAGICAL☆12Jun 26, 2024Updated last year
- A custom git utility for managing file sizes in your git workflow.☆11Jan 17, 2022Updated 4 years ago
- Material for the DataLucence:Images course☆10Jun 14, 2017Updated 9 years ago
- Cell-cell communication and lineage inference for scRNA-seq data☆25May 3, 2023Updated 3 years ago
- SoptSC for single cell data analysis: unsupervised inference of clustering, cell lineage, pseudotime and cell-cell communication network …☆22Dec 12, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆20Jan 6, 2023Updated 3 years ago
- HiDeF (Hierarchical community Decoding Framework)☆15Jan 30, 2024Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- ☆12Mar 18, 2026Updated 2 months ago
- A method to predict DNA shape features considering farther flanking region.☆41Sep 25, 2024Updated last year
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆15Aug 17, 2023Updated 2 years ago
- Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.☆68Jan 3, 2023Updated 3 years ago
- ☆15Apr 8, 2026Updated 2 months ago
- MathIOmica is a Mathematica package for omics data analyses☆12Mar 30, 2026Updated 2 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Jupyter notebook of my autoencoder presentation☆14Jan 30, 2017Updated 9 years ago
- ☆10Sep 20, 2022Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- Causal inference, differential expression, and co-expression for scRNA-seq☆21Updated this week
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆24Jul 10, 2024Updated last year
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆21Dec 15, 2025Updated 6 months ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Jul 15, 2025Updated 11 months ago
- ☆34Oct 4, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Geometric deep learning of protein–DNA binding specificity☆79Mar 19, 2025Updated last year
- R package IReNA☆31Nov 13, 2024Updated last year
- Universal Single-Cell Genomics Preprocessing package☆49Feb 21, 2026Updated 3 months ago
- Tejaas - a tool for discovering trans-eQTLs☆12Oct 14, 2022Updated 3 years ago
- Global Waddington-OT☆23Mar 25, 2025Updated last year
- An automatic deep learning algorithm for spot detection in fluorescence microscopy images.☆28Apr 6, 2026Updated 2 months ago
- Write great documents with markdown, then execute in the shell.☆10Sep 1, 2017Updated 8 years ago
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆27Apr 3, 2026Updated 2 months ago
- Colour and fill scales for 'ggplot2' using colour spaces.☆15Apr 28, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆23May 21, 2026Updated 3 weeks ago
- 2022 PhysiCell Hackathon and Workshop☆12Jul 29, 2022Updated 3 years ago
- This is the fully public version of QSP Toolbox. Please check the README file for the current version of MATLAB that is supported.☆25Dec 29, 2025Updated 5 months ago
- Repo for using an LSTM and other algorithms on time series data for anomaly detection☆16Mar 25, 2023Updated 3 years ago
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆29Jan 29, 2025Updated last year
- DrugHIVE: Structure-based drug design with a deep hierarchical generative model☆115Oct 31, 2024Updated last year