☆11Aug 2, 2024Updated last year
Alternatives and similar repositories for BridgeRNA2024
Users that are interested in BridgeRNA2024 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software package to design bridge RNAs as described by Durrant & Perry et al.☆24Sep 25, 2025Updated 6 months ago
- This repo contains the results data for Round 2 of EGFR Protein Design Competition.☆18Mar 18, 2025Updated last year
- Design data and process for the AdaptyvBio protein design competition☆10Dec 11, 2024Updated last year
- Teaching materials for cobrapy, cameo, escher and DD-DeCaF☆26Jul 12, 2022Updated 3 years ago
- Code to go along with Velasco et. al.☆11Jun 5, 2019Updated 6 years ago
- Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model☆25Nov 18, 2024Updated last year
- A nano protein structure prediction model based on DeepMind's AlphaFold paper☆34Jun 7, 2024Updated last year
- Sequences from Adaptyv Bio’s EGFR Protein Design Competition☆15Aug 28, 2025Updated 6 months ago
- ☆17Jul 27, 2023Updated 2 years ago
- Official repo of "Towards Interpretable Protein Structure Prediction with Sparse Autoencoders" published at ICLR 2025 GEM workshop.☆16Mar 13, 2025Updated last year
- Vaeda method for computational doublet annotation☆19Feb 1, 2026Updated last month
- ☆11Mar 11, 2025Updated last year
- Analysis pipeline for CUT&TAG data☆23Sep 2, 2020Updated 5 years ago
- A small collection of useful tutorials and links☆15Apr 13, 2024Updated last year
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆33Jan 25, 2026Updated 2 months ago
- List stargazers and check if a user starred that repository.☆14Mar 6, 2019Updated 7 years ago
- ☆13Feb 22, 2022Updated 4 years ago
- ☆18Jun 22, 2024Updated last year
- ☆17Sep 10, 2024Updated last year
- ☆10Jan 24, 2023Updated 3 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Python script for creating and analyzing simulated bpp datasets published in Flouris et al. 2019.☆10May 12, 2019Updated 6 years ago
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- ☆11Sep 27, 2022Updated 3 years ago
- ALignment Transformation EnviRonment☆11May 8, 2018Updated 7 years ago
- Real-time structure motif searching in protein 3D structures using an inverted index strategy☆14Jul 19, 2025Updated 8 months ago
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Aug 2, 2021Updated 4 years ago
- CATH: high-throughput protein structure/function annotations☆12Dec 17, 2019Updated 6 years ago
- Tools to analyze the differences and similarities between CRISPR arrays☆11Dec 17, 2024Updated last year
- The Density Functional Theory for Electrolyte Solutions☆10Sep 13, 2022Updated 3 years ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- R API and htmlwidget for Vitessce☆44Aug 13, 2025Updated 7 months ago
- Participate in the 4th U.S. National Action Plan for Open Government☆13Jun 8, 2018Updated 7 years ago
- ☆16Feb 20, 2026Updated last month
- ☆16Apr 11, 2023Updated 2 years ago
- Python package to run DefensePredictor, a model that identifies proteins involved in anti-phage defense☆17Dec 17, 2025Updated 3 months ago
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15May 9, 2019Updated 6 years ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated 11 months ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Feb 6, 2023Updated 3 years ago