A local version of SAI, the automated stomata measuring tool
☆24May 30, 2024Updated last year
Alternatives and similar repositories for SAI-app
Users that are interested in SAI-app are comparing it to the libraries listed below
Sorting:
- DCN stomata prediction on epidermal images☆11Dec 8, 2022Updated 3 years ago
- Ready-to-use High-throughput Counting and Measuring plant leaf Stomatal and guard cells☆14Jan 25, 2026Updated last month
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆15Aug 27, 2023Updated 2 years ago
- PanTE: A Comprehensive Framework for Transposable Element Discovery in Graph-based Pangenomes☆24Jan 16, 2026Updated last month
- Explore potential Biosynthetic Gene Clusters in plant genomes. This tool is originally sourced from antiSMASH 4.0.☆35Feb 26, 2026Updated last week
- Strawberry detection by using the YOLOv8 model, Ripeness measurement of strawberry by using OpenCV and Measure distance of strawberry fro…☆14Oct 31, 2023Updated 2 years ago
- A comprehensive IMU library for Sony Spresense Multi-IMU Add-on board.☆15Jul 16, 2025Updated 7 months ago
- A Snakemake-based pipeline for gene mapping in Triticeae.☆11Mar 5, 2022Updated 4 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 2 years ago
- A python port of the Single Molecule Tools software by Adam Wollman, aka. ADEMSCode.☆11Updated this week
- A R tool to parse and visualize chloroplast genomes☆12Dec 1, 2021Updated 4 years ago
- ☆11Sep 27, 2024Updated last year
- ☆41Jun 8, 2023Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆110Feb 24, 2026Updated last week
- The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome …☆11Jul 27, 2023Updated 2 years ago
- ☆11Nov 4, 2025Updated 4 months ago
- Spatiotemporal Clustering and Inference of Omics Networks (SC-ION)☆12Oct 24, 2024Updated last year
- Software for detecting transposable element insertions from next-generation sequencing data☆10Feb 24, 2023Updated 3 years ago
- A simple Unity project demonstrating how to perform object detection with the barracuda-inference-yolox package.☆12Sep 28, 2023Updated 2 years ago
- Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"☆10Jul 11, 2023Updated 2 years ago
- Code for accurate inference of tree topologies from multiple sequence alignments using deep learning☆10Nov 3, 2019Updated 6 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- TF-DNA-binding assay analysis pipeline☆13Aug 25, 2020Updated 5 years ago
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated last year
- Rice Yield CNN is a model to estimate the rice yield based on RGB image of rice canopy at harvest. The model is developed based on more t…☆11Nov 8, 2021Updated 4 years ago
- Token based authentication to communicate between a Shiny app and remote app.☆14Aug 10, 2015Updated 10 years ago
- A Python class that implements a Gated CNN using Keras with TensorFlow backend.☆11Apr 20, 2018Updated 7 years ago
- ☆14Sep 29, 2020Updated 5 years ago
- An explainable Deep Machine Vision framework for Plant Stress Phenotyping☆15Jun 29, 2021Updated 4 years ago
- Native build of Qt5 creator on Raspberry Pi 4 with OpenCV support☆11Jul 18, 2023Updated 2 years ago
- 𝛂Charges: A tool for the quick calculation of partial atomic charges for protein structures from AlphaFold DB☆12Dec 16, 2025Updated 2 months ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Feb 15, 2020Updated 6 years ago
- Plant genome assembly and annotation pipeline using snakemake☆53May 14, 2025Updated 9 months ago
- ☆11Sep 17, 2020Updated 5 years ago
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- A toolkit for automated local phylogenomic analyses, or ALPHA☆12Oct 23, 2019Updated 6 years ago
- Workflow for detecting genome-wide horizontal gene transfers☆10May 29, 2018Updated 7 years ago
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Jul 30, 2019Updated 6 years ago
- HOTSPOT is a hierarchical host prediction tool for plasmid contigs using Transformer.☆10Apr 22, 2024Updated last year