Computational-Plant-Science / plantitLinks
☆11Updated last month
Alternatives and similar repositories for plantit
Users that are interested in plantit are comparing it to the libraries listed below
Sorting:
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Updated 4 years ago
- International BioHackathon Directory of Events, Projects and Communities☆11Updated last week
- Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"☆28Updated 2 years ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆9Updated 5 months ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated 2 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Updated last week
- DeepProfile framework, which learns a variational autoencoder (VAE) network from a vast quantity of publicly available gene expression sa…☆19Updated 7 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆33Updated last year
- SODAR: System for Omics Data Access and Retrieval☆15Updated this week
- Major Histocompatibility Complex (MHC) Binding Affinity Prediction☆10Updated 4 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆34Updated last year
- Sparse Canonical Correlation Analysis (sCCA)☆20Updated 3 years ago
- GECO (Gene Expression Clustering Optimization; theGECOapp.com) is a minimalistic GUI app that utilizes non-linear reduction techniques to…☆9Updated 2 years ago
- Python interface to amino acid properties and IEDB☆56Updated 9 months ago
- Explore biomolecular pathways in Reactome from the command-line or a Python script☆24Updated 9 months ago
- bioinformatics visualization tools with pyviz/bokeh☆20Updated last year
- Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"☆32Updated 6 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Updated 2 years ago
- A specification and Python implementation for representing variants from Multiplexed Assays of Variant Effect.☆10Updated 2 months ago
- My computational biology course as it evolves in real time☆14Updated 3 years ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 2 years ago
- Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure☆12Updated 10 months ago
- A project to capture biological pathway data from academic papers☆29Updated 3 months ago
- A metadata commons to store research software metadata☆41Updated this week
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Updated last year
- Deep learning-based prediction of regulatory genome sequences☆12Updated 5 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Updated 5 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- ☆10Updated last year