cmongis / psfjLinks
PSFj - Know your microscope fluorescence
☆24Updated 5 years ago
Alternatives and similar repositories for psfj
Users that are interested in psfj are comparing it to the libraries listed below
Sorting:
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- ☆24Updated 4 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- Lattice light-sheet post-processing utility.☆30Updated last week
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 9 months ago
- Dataset EXploration & Processing☆33Updated 2 years ago
- ☆36Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- Core functionality of NanoJ☆17Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- python tools for BigDataViewer☆22Updated last year
- Process images using SimpleITK in napari☆23Updated 9 months ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆17Updated this week
- ☆23Updated 4 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- A 3D interactivity toolbox for napari☆37Updated 7 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 3 months ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- A self-supervised denoising algorithm.☆28Updated last year
- ☆14Updated 2 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 10 months ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆37Updated 4 months ago
- ImageJ convenience layer for N5☆19Updated last week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 10 months ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Updated last week
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆19Updated 7 months ago
- Gamified image segmentation quality estimation☆19Updated 9 months ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 5 years ago