delunapaolo / calipy
Real-time, interactive exploration of 3D image stacks
☆13Updated 5 years ago
Alternatives and similar repositories for calipy
Users that are interested in calipy are comparing it to the libraries listed below
Sorting:
- FluoRender is an interactive tool for confocal microscopy data analysis.☆45Updated this week
- A python script editor plugin for napari☆11Updated last year
- Volume Slicing and Editing☆33Updated last month
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆54Updated last month
- ☆21Updated 3 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- A napari plugin for itk-elastix☆38Updated 11 months ago
- Online documentation and reference for CLIJ☆28Updated 3 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 weeks ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆32Updated last week
- Modified version of MultiStackRegistration, for use from scripts.☆12Updated 3 years ago
- The ImageJ plugin to run deep-learning models☆92Updated last week
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆74Updated last month
- ☆20Updated 2 years ago
- Distributed segmentation for bio-image-analysis☆38Updated this week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆48Updated 3 weeks ago
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 9 months ago
- The python-microscopy environment - an open-source package for light microscopy☆89Updated this week
- Create 3D/4D animations using a natural language-based syntax☆59Updated 2 years ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆34Updated last month
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆84Updated last year
- Create movies from series of key-frames in napari.☆38Updated 3 years ago
- Easily read and write ome-tiff images in python☆27Updated last year
- Generate multifunctional and macro recordable GUIs from Python classes☆44Updated last week
- Read Olympus image files (OIF and OIB).☆13Updated last week
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆25Updated 2 weeks ago
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated 2 weeks ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 4 years ago
- GPU-accelerated image processing for everyone☆52Updated 10 months ago
- 2D image registration in python, using napari.☆16Updated 3 years ago