Ajaxels / MIB2Links
Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microscopy datasets
☆33Updated last month
Alternatives and similar repositories for MIB2
Users that are interested in MIB2 are comparing it to the libraries listed below
Sorting:
- Lattice light-sheet post-processing utility.☆29Updated last week
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 5 years ago
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆65Updated last week
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 10 months ago
- ☆21Updated 3 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆61Updated 4 months ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆44Updated last week
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 3 months ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated 2 weeks ago
- The python-microscopy environment - an open-source package for light microscopy☆89Updated last month
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆31Updated 9 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated 2 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 11 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 10 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 4 months ago
- A napari plugin for itk-elastix☆38Updated last year
- A general illumination correction method for optical microscopy.☆41Updated 3 years ago
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 11 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆42Updated 2 weeks ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last week
- A Python library for easily calculating image-quality related features from images☆18Updated 2 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆41Updated 8 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆75Updated last week
- ☆37Updated last year