lens-biophotonics / dcimg
A Python module for accessing Hamamatsu DCIMG files
☆14Updated last year
Alternatives and similar repositories for dcimg:
Users that are interested in dcimg are comparing it to the libraries listed below
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 3 weeks ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆22Updated 3 years ago
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- Create movies from series of key-frames in napari.☆37Updated 3 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated this week
- A napari plugin to analysis point spread functions.☆11Updated 4 months ago
- Denoising via adaptive binning.☆12Updated 8 months ago
- How to use Aligning Big Brains and Atlases with Python☆15Updated last year
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆17Updated last week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 months ago
- ☆13Updated 4 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 3 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 weeks ago
- Use ImageJ functionality from napari☆27Updated last month
- ☆30Updated last week
- Process images using SimpleITK in napari☆20Updated 4 months ago
- ☆18Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 6 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated 3 weeks ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 4 months ago
- Tools for distributed alignment of massive images☆80Updated 2 weeks ago
- Use Napari Viewer to display CZI images☆11Updated 2 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- Browse your OMERO database from within napari.☆35Updated this week
- Multiple file format reading directly into napari using pure Python☆35Updated 7 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- 1d plotting in napari-based canvas.☆26Updated this week