lazear / simd-euclideanLinks
Calculation of euclidean distance between vectors, with SIMD
☆11Updated last year
Alternatives and similar repositories for simd-euclidean
Users that are interested in simd-euclidean are comparing it to the libraries listed below
Sorting:
- Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.☆20Updated last month
- Parallel Construction of Suffix Arrays in Rust☆26Updated 7 months ago
- Hardware go brrr bounded context suffix array construction algorithm☆19Updated 2 years ago
- Efficient querying of biological databases☆42Updated last month
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Updated 8 months ago
- ☆22Updated 3 years ago
- A very fast interval tree data structure☆124Updated 10 months ago
- A library of common biomedical types.☆40Updated 7 months ago
- Alignment-based gene expression quantification☆30Updated 3 months ago
- Simple and transparent support for compressed files.☆81Updated 9 months ago
- Rust package for constructing and analyzing phylogenies. (unpolished & unmaintained)☆15Updated 7 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated last year
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆129Updated 4 years ago
- Rust implementation of a fast, easy, interval tree library nim-lapper☆67Updated 5 months ago
- bgzip support for Rust☆16Updated 2 years ago
- Rust utility code☆32Updated last year
- A Python library for working on Bioinformatics problems☆14Updated this week
- Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms☆30Updated 5 months ago
- Analyzes whole genome sequencing data for gene-editing verification☆10Updated last month
- PCA in rust☆15Updated 2 years ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆21Updated 7 months ago
- Rust coder/decoder for Nucleotide Archival Format (NAF) files.☆10Updated 10 months ago
- Parallel Barnes-Hut t-SNE implementation written in Rust.☆87Updated 4 months ago
- ☆15Updated last week
- ☆50Updated 3 years ago
- A library for easy, fast, and efficient reading & writing of PLINK Bed files☆82Updated 8 months ago
- Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.☆21Updated 9 years ago
- Fast sequence distance estimates☆24Updated 3 months ago
- An ultrafast and memory efficient tool for phylogenomics☆26Updated 4 months ago
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆38Updated last month