Alternatives and similar repositories for shu

Users that are interested in shu are comparing it to the libraries listed below

• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆42Updated 3 weeks ago
• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆80Updated 8 months ago
• rust-bio / rust-bio-types
  A library of common biomedical types.
  ☆39Updated 6 months ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆32Updated last year
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated 2 years ago
• ferritin-bio / ferritin
  protein utilities in Rust
  ☆32Updated 4 months ago
• RagnarGrootKoerkamp / rust-phylogeny
  Rust package for constructing and analyzing phylogenies. (unpolished & unmaintained)
  ☆15Updated 5 months ago
• anp / parasailors
  Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.
  ☆21Updated 9 years ago
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆26Updated 5 months ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆78Updated 7 months ago
• dlesl / gb-io
  A Rust library for parsing, writing and manipulating Genbank sequence files
  ☆21Updated 6 months ago
• aseyboldt / fastq-rs
  ☆50Updated 3 years ago
• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆101Updated this week
• stjude-rust-labs / omics
  Foundations for the Rust omics ecosystem.
  ☆11Updated last month
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆16Updated last year
• fastobo / fastobo
  Faultless AST for Open Biomedical Ontologies.
  ☆29Updated 8 months ago
• sstadick / rust-lapper
  Rust implementation of a fast, easy, interval tree library nim-lapper
  ☆65Updated 3 months ago
• jakobnissen / alen
  Simple terminal alignment viewer
  ☆85Updated 2 months ago
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆128Updated 4 years ago
• RagnarGrootKoerkamp / sassy
  Fast approximate string searching
  ☆57Updated last month
• lazear / simd-euclidean
  Calculation of euclidean distance between vectors, with SIMD
  ☆11Updated last year
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆28Updated last month
• zachcp / bioinformaticstoolkit
  Build and deploy cross platform bioinformatic utilities with Rust.
  ☆19Updated 6 months ago
• frjnn / bhtsne
  Parallel Barnes-Hut t-SNE implementation written in Rust.
  ☆87Updated 3 months ago
• Armavica / rebop
  Fast stochastic simulator for chemical reaction networks
  ☆46Updated last week
• fastlmm / bed-reader
  A library for easy, fast, and efficient reading & writing of PLINK Bed files
  ☆81Updated 6 months ago
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆18Updated last year
• ostnam / rust-wfa
  ☆12Updated 3 years ago
• habedi / graphina
  A graph data science library for Rust
  ☆68Updated last week
• jeanmanguy / spideog
  🐦 spideog - Command line utility for Kraken2 reports.
  ☆11Updated 4 years ago