jean-pierreBoth / annembed

Related projects: ⓘ

• frjnn / bhtsne
  Parallel Barnes-Hut t-SNE implementation written in Rust.
  ☆63Updated 2 years ago
• lazear / simd-euclidean
  Calculation of euclidean distance between vectors, with SIMD
  ☆11Updated 8 months ago
• ritchie46 / lsh-rs
  Locality Sensitive Hashing in Rust with Python bindings
  ☆110Updated last year
• diffeo / kodama
  Fast hierarchical agglomerative clustering in Rust.
  ☆90Updated 8 months ago
• Daniel-Liu-c0deb0t / triple_accel
  Rust edit distance routines accelerated using SIMD. Supports fast Hamming, Levenshtein, restricted Damerau-Levenshtein, etc. distance cal…
  ☆101Updated last year
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆17Updated 10 months ago
• sstadick / rust-lapper
  Rust implementation of a fast, easy, interval tree library nim-lapper
  ☆55Updated 5 months ago
• 10XGenomics / rust-shardio
  Out-of-memory sorting of large datasets map / reduce style processing
  ☆47Updated 2 weeks ago
• petabi / petal-decomposition
  Matrix decomposition algorithms including PCA (principal component analysis) and ICA (independent component analysis)
  ☆13Updated last month
• Cydhra / vers
  Succinct data structures using very efficient rank and select
  ☆58Updated last week
• Tudyx / ai-dataloader
  A rust port of pytorch dataloader
  ☆20Updated last week
• fastlmm / bed-reader
  A library for easy, fast, and efficient reading & writing of PLINK Bed files
  ☆73Updated 2 months ago
• regexident / rust-seal
  Rust implementation of Needleman-Wunsch & Smith-Waterman sequence alignment
  ☆20Updated 2 years ago
• dlesl / gb-io
  A Rust library for parsing, writing and manipulating Genbank sequence files
  ☆14Updated 11 months ago
• biosustain / shu
  Multi-dimensional, trans-omics metabolic maps.
  ☆41Updated last month
• wheretrue / exon
  Exon is an OLAP query engine specifically for biology and life science applications.
  ☆47Updated last week
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆37Updated this week
• rust-bio / rust-bio-types
  A library of common biomedical types.
  ☆33Updated last week
• jeffrey-xiao / probabilistic-collections-rs
  ☆15Updated last year
• rapidfuzz / rapidfuzz-rs
  Rapid fuzzy string matching in Rust using various string metrics
  ☆33Updated 2 months ago
• dcjones / coitrees
  A very fast interval tree data structure
  ☆110Updated 3 months ago
• vigna / sux-rs
  Rust implementations of succinct data structures
  ☆43Updated this week
• rossanoventurini / qwt
  A Rust implementation of the Quad Wavelet Tree
  ☆31Updated 4 months ago
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆116Updated 3 years ago
• zachcp / bioinformaticstoolkit
  Build and deploy cross platform bioinformatic utilities with Rust.
  ☆14Updated last month
• sdsl-rs / sdsl-rs
  A Rust interface for the Succinct Data Structure Library.
  ☆14Updated 2 years ago
• aseyboldt / fastq-rs
  ☆46Updated 2 years ago
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆28Updated this week
• 10XGenomics / rust-boomphf
  Fast and scalable minimal perfect hashing for massive key sets
  ☆125Updated 2 months ago
• slotThe / rq
  Functional command-line JSON processor
  ☆24Updated last month