laminlabs / nbprojectLinks
Light-weight Jupyter notebook tracker.
☆34Updated last month
Alternatives and similar repositories for nbproject
Users that are interested in nbproject are comparing it to the libraries listed below
Sorting:
- requirements, examples, and tests for expression matrix file formats☆22Updated 6 years ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆59Updated last month
- A performant scientific image visualization system.☆35Updated last week
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated 2 weeks ago
- Utilities for large scale distributed single cell data processing☆24Updated last week
- Convert bioinformatics file formats to Zarr☆36Updated 3 weeks ago
- Fit generalized linear models in python.☆27Updated 2 years ago
- Shadow objects for AnnData and MuData (experimental)☆12Updated 3 months ago
- Slides and Notebooks for scverse 2024☆17Updated 9 months ago
- Build contrasts for models defined with formulaic☆13Updated 2 weeks ago
- Registries for biological entities, coupled to public ontologies.☆16Updated this week
- Automatically annotate cell types, consistently across samples.☆13Updated 2 months ago
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆75Updated last week
- a minimal, scriptable genome browser for python☆51Updated 6 months ago
- Multi-omics factor analysis v2☆45Updated 8 months ago
- Python API and Jupyter widget for Vitessce☆47Updated this week
- WebGL-based viewer for spatially-resolved transcriptomics data☆26Updated 2 years ago
- Multimodal Data (.h5mu) implementation for Python☆99Updated 3 weeks ago
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 3 years ago
- Legend made easy for matplotlib☆28Updated 2 weeks ago
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆28Updated 3 weeks ago
- Bam to Pandas DataFrame, quickly☆13Updated last month
- Single-cell multi-omics integration using Optimal Transport☆45Updated 9 months ago
- An interface for Nested Stochastic Block Model for single cell analysis☆35Updated 3 months ago
- A toolking for cell type hierarchies: marker selection & consistent classification☆22Updated last year
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆15Updated 2 years ago
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆12Updated 3 weeks ago
- ☆16Updated 5 months ago
- Spatial Transcriptomics Dashboard☆27Updated last year
- Data Science Operations (dso) command line tool☆37Updated last month