[MIRROR] Emacs support for Snakemake
☆35Feb 4, 2025Updated last year
Alternatives and similar repositories for snakemake-mode
Users that are interested in snakemake-mode are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Emacs major mode for Nextflow☆25Jan 11, 2025Updated last year
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Aug 19, 2017Updated 8 years ago
- Simulate GWAS data from an arbitrary DAG☆11Oct 29, 2025Updated 5 months ago
- A Rust library for building modular, fast and compact indexes over genomic data☆12Nov 22, 2023Updated 2 years ago
- ☆13May 2, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Let someone else take care of keeping up to date tangled/woven versions of your Org files for public consumption.☆31Oct 8, 2022Updated 3 years ago
- Code and analysis for the 1000 tools paper☆11Nov 12, 2021Updated 4 years ago
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆50Apr 1, 2026Updated last week
- Extends miniwdl to run workflows on AWS Batch & EFS☆22Feb 5, 2024Updated 2 years ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- ☆13Jul 28, 2023Updated 2 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19May 13, 2016Updated 9 years ago
- Simple HTML package documentation☆12Jan 14, 2026Updated 3 months ago
- This repository collects links to ESS configurations shared by #rstats community members.☆59Feb 16, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- An org-cite processor that is like org-ref.☆40Feb 26, 2022Updated 4 years ago
- A tool for merging large BWTs☆24Nov 26, 2020Updated 5 years ago
- Identify cell types and pathways affected by genetic risk loci.☆36Feb 29, 2024Updated 2 years ago
- Imputation of parental genotypes, inference of sibling IBD segments, family based GWAS, and polygenic score analyses.☆38Feb 9, 2026Updated 2 months ago
- Language support and snippets for Snakemake workflows (Snakefile, *.smk) for Visual Studio Code and Apache Theia.☆23Apr 2, 2026Updated last week
- The snakemake interface, currently works like a notebook (under development)☆20Mar 12, 2026Updated last month
- Reproducible Snakemake workflow for benchmarking single-cell chromatin accessibility analysis methods, published in https://doi.org/10.11…☆17Jan 24, 2026Updated 2 months ago
- Radix sort implementation for sorting by scalar keys (integers, floats, chars, bools)☆25Aug 19, 2024Updated last year
- Code for performing PCA followed by CCA☆18Dec 2, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Source code of Statistical Computing 2 website☆12Feb 6, 2023Updated 3 years ago
- Small hack to draw date histogram facets as graph using nvd3.js☆54Nov 21, 2012Updated 13 years ago
- Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.☆20Dec 2, 2025Updated 4 months ago
- CloudFlare Dynamic DNS Client☆17Jun 29, 2024Updated last year
- Rough and dirty web Mud game - using SockJS and Django☆21Nov 3, 2011Updated 14 years ago
- ☆13Feb 29, 2024Updated 2 years ago
- Flexible omics pipeline☆17Oct 16, 2025Updated 5 months ago
- ☆61Jun 14, 2021Updated 4 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆39Jul 9, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆14Mar 27, 2026Updated 2 weeks ago
- Onboarding materials for the Greene Lab☆33Feb 10, 2026Updated 2 months ago
- An R package to construct Elastic Principal Graphs☆24Nov 29, 2019Updated 6 years ago
- A Github template for writing LaTeX documents collaboratively with automatic rendering using Github actions.☆25Jan 17, 2023Updated 3 years ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆15Oct 10, 2019Updated 6 years ago
- ☆25Mar 3, 2020Updated 6 years ago
- genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF☆148Feb 17, 2026Updated last month