kyleam / snakemake-modeLinks
[MIRROR] Emacs support for Snakemake
☆36Updated 7 months ago
Alternatives and similar repositories for snakemake-mode
Users that are interested in snakemake-mode are comparing it to the libraries listed below
Sorting:
- Emacs major mode for Nextflow☆23Updated 7 months ago
- Response to blog post about Salmon☆37Updated 8 years ago
- Author academic documents in markdown☆12Updated this week
- Flexible omics pipeline☆18Updated 3 months ago
- A Github action for running a Snakemake workflow☆58Updated 2 months ago
- multi_tbx: a simple tool for indexing VCF files and extract variant records for variant data stored in multiple VCF files.☆10Updated 3 years ago
- Implementation of the treeSeg algorithm as an R package.☆14Updated 3 years ago
- Phylogenetic Likelihood Library☆29Updated 4 years ago
- Introduction to Snakemake for Bioinformatics☆20Updated last week
- ☆17Updated last year
- Manager for multi-container computing environments☆25Updated 10 months ago
- Interface to various variant calling formats.☆30Updated last year
- A demo of the Python C API for CodeMonkeys☆20Updated 7 years ago
- Source code for SimBac, a bacterial genome simulator☆13Updated 11 months ago
- Snakemake tutorial materials☆19Updated 5 years ago
- A cookiecutter template that reflects my favored structure for setting up Snakemake-based analysis pipelines.☆16Updated 9 years ago
- Toolkit to analyze genomic variation data, built on the GATK with Clojure☆66Updated 9 years ago
- Documentation of the Snakemake-Profiles project.☆54Updated 3 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Infer a tree sequence from genetic variation data.☆60Updated last week
- Browser-based utility for phylogenetic tree visualisation.☆40Updated 3 months ago
- A workflow for creating small NGS test data sets, useful for continuous integration.☆23Updated last year
- ☆22Updated 8 years ago
- A simple Snakemake profile for Slurm without --cluster-config☆161Updated last year
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- A Pedantic FASTA Parser and Tool Set☆14Updated 5 years ago
- Multinomial Logistic-Normal Models (really fast)☆21Updated 6 months ago
- My blog.☆16Updated 3 weeks ago
- ☆25Updated 6 years ago
- Automatically exported from code.google.com/p/macs☆16Updated 5 years ago