edmundmiller / nextflow-modeLinks
Emacs major mode for Nextflow
☆23Updated 9 months ago
Alternatives and similar repositories for nextflow-mode
Users that are interested in nextflow-mode are comparing it to the libraries listed below
Sorting:
- [MIRROR] Emacs support for Snakemake☆35Updated 9 months ago
 - A collection of unexpected challenges and learnings with nextflow and nf-core.☆40Updated 2 years ago
 - Toolkit to analyze genomic variation data, built on the GATK with Clojure☆66Updated 10 years ago
 - Tips for Nextflow and cheatsheet for channel operation☆80Updated last year
 - CLI for interacting with Cromwell servers☆55Updated last year
 - A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Updated 3 years ago
 - Demultiplexing pipeline for sequencing data☆51Updated this week
 - Infer a tree sequence from genetic variation data.☆60Updated 2 weeks ago
 - A workflow for creating small NGS test data sets, useful for continuous integration.☆24Updated last year
 - Software for predicting library complexity and genome coverage in high-throughput sequencing.☆88Updated last year
 - Links to resources related to bioinformatics and data analysis.☆27Updated 3 months ago
 - Example Nextflow pipelines and programming techniques☆106Updated last month
 - Documentation of the Snakemake-Profiles project.☆54Updated 3 years ago
 - Params validation plugin for Nextflow pipelines☆48Updated last year
 - High throughput sequencing analysis tools☆30Updated 6 months ago
 - Python Primer Design Library☆14Updated last month
 - Response to blog post about Salmon☆37Updated 8 years ago
 - NGSNGS: Next generation simulator for next generation sequencing data☆54Updated 11 months ago
 - An aDNA aware short-read mapper☆21Updated 5 months ago
 - R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions☆11Updated last year
 - Snakemake profile for running jobs on an LSF cluster☆38Updated last year
 - A collection of scripts to assist in the retrieval of data from the ENA Browser☆89Updated 3 months ago
 - A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.☆32Updated 5 months ago
 - SARS-CoV-2 workflow for nanopore sequence data☆42Updated 2 months ago
 - Model files for Sentieon variant callers☆16Updated last month
 - Grep for FASTQ files☆98Updated 6 months ago
 - A C library for handling bigWig files☆81Updated 9 months ago
 - A Pedantic FASTA Parser and Tool Set☆14Updated 5 years ago
 - Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆45Updated last week
 - Standalone C library for assembling Illumina short reads in small regions☆72Updated 2 years ago