Flexible omics pipeline
☆17Oct 16, 2025Updated last year
Alternatives and similar repositories for ymp
Users that are interested in ymp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tutorial for working with cloud infrastructure and AWS from R☆20Jul 26, 2017Updated 9 years ago
- NIH BYOB Presentation Materials☆31Jul 22, 2022Updated 4 years ago
- Semi-Automatic Taxonomy Improvement and Validation Algorithm☆21Jan 8, 2024Updated 2 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- A Ruffus pipeline for Analysis of High-Throughput Sequencing data☆12Apr 3, 2013Updated 13 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- conda recipes for genomic data☆84Jul 31, 2021Updated 5 years ago
- example of shiny plots which react to clicking on points☆11Jun 18, 2015Updated 11 years ago
- Code for performing PCA followed by CCA☆19Dec 2, 2018Updated 7 years ago
- Go implementation of ntHash☆20Sep 16, 2021Updated 5 years ago
- ☆14May 12, 2023Updated 3 years ago
- The documentation for the Clustergrammer project☆10Oct 21, 2020Updated 6 years ago
- AWS lambda S3 + rust-htslib: A serverless bioinformatics example☆14Jun 7, 2022Updated 4 years ago
- Class materials for the NIH HPC snakemake class☆16Sep 27, 2024Updated 2 years ago
- Clinical Whole Genome and Exome Sequencing Pipeline☆31Aug 26, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 5 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Apr 23, 2021Updated 5 years ago
- ☆19Dec 6, 2022Updated 3 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Oct 14, 2026Updated 2 weeks ago
- Histosketching Using Little Kmers☆56May 25, 2023Updated 3 years ago
- ☆11Dec 8, 2022Updated 3 years ago
- A database for signatures of public genomic sources☆18Jul 18, 2026Updated 3 months ago
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The Data-Centered Data Flow manager for R☆19Aug 4, 2026Updated 2 months ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- taxonomic classes for Python☆11Aug 30, 2021Updated 5 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- Snakemake with pytest example☆11Jul 18, 2020Updated 6 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- ☆17Jan 5, 2021Updated 5 years ago
- a simple read-only sequence database, designed for short reads☆66Apr 25, 2026Updated 6 months ago
- benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.☆20Sep 21, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- a place for topmed workflows☆12Feb 3, 2022Updated 4 years ago
- Model Context Protocol server for gnomAD (Genome Aggregation Database) GraphQL API☆10Aug 13, 2025Updated last year
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 5 years ago
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆23Jun 18, 2021Updated 5 years ago
- Notes on R and Singularity☆12Apr 26, 2018Updated 8 years ago
- Workflow to generate interactive feature selection report for cross-sectional or longitudinal studies☆11Apr 3, 2026Updated 6 months ago