Alternatives and similar repositories for ymp

Users that are interested in ymp are comparing it to the libraries listed below

• sourmash-bio / databases
  Build sourmash databases for genbank.
  ☆12Updated 2 years ago
• vsbuffalo / snakemake-tutorial
  Snakemake tutorial materials
  ☆19Updated 5 years ago
• karel-brinda / ococo
  Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.
  ☆47Updated 6 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 7 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• kdm9 / axe
  Rapid competitive read demulitplexer. Made with tries.
  ☆23Updated last month
• xa6xa6 / metaOthello
  ☆16Updated 7 years ago
• kevlar-dev / kevlar
  Reference-free variant discovery in large eukaryotic genomes
  ☆41Updated 4 years ago
• BenLangmead / qtip
  Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities
  ☆25Updated 5 years ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆36Updated 2 years ago
• iqbal-lab / cortex
  reference free variant assembly
  ☆33Updated 2 years ago
• nickloman / ebov
  Ebola virus surveillance
  ☆16Updated 8 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• jts / bri
  Bam Read Index - Extract alignments from a bam file by readname
  ☆27Updated last year
• brentp / geneimpacts
  prioritize effects of variant annotations from VEP, SnpEff, et al.
  ☆34Updated 7 months ago
• myriad-opensource / samwell
  Samwell: a python package for using genomic files... well
  ☆20Updated 3 years ago
• phiweger / darkq
  A message queue for genomic surveillance
  ☆20Updated 3 years ago
• camillescott / shmlast
  blast, shmlast
  ☆22Updated 4 years ago
• cancerit / cgpBigWig
  BigWig manpulation tools using libBigWig and htslib
  ☆29Updated 11 months ago
• hallamlab / LCAStar
  Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree
  ☆16Updated last year
• cdarby / samovar
  Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters
  ☆24Updated 6 years ago
• carpentries-incubator / snakemake-novice-bioinformatics
  Introduction to Snakemake for Bioinformatics
  ☆19Updated last week
• IGBB / quack
  A FASTQ quality assessment tool
  ☆14Updated 2 years ago
• DecodeGenetics / BamHash
  ☆37Updated 4 years ago
• csiro-crop-informatics / biokanga
  An integrated high performance bioinformatics toolkit
  ☆23Updated 6 years ago
• kloetzl / pfasta
  A Pedantic FASTA Parser and Tool Set
  ☆14Updated 5 years ago
• sjackman / assembly-graph
  Compare assembly graph file formats
  ☆15Updated 9 years ago
• nickloman / poredb
  ☆19Updated 8 years ago
• snz20 / carnelian
  ☆11Updated 4 years ago
• ryanlayer / svv
  Stupid Simple Structural Variant View
  ☆25Updated 8 years ago