Concise Common Workflow Language
☆29Mar 24, 2026Updated 3 weeks ago
Alternatives and similar repositories for ccwl
Users that are interested in ccwl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- guix packages for bioinformatics software☆23Jan 22, 2024Updated 2 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago
- ☆16Aug 25, 2025Updated 7 months ago
- High-reproducibility CWL runner powered by Guix☆22Mar 23, 2026Updated 3 weeks ago
- ☆11Dec 9, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rust implementation of Flavia95's GFAtoVCF☆16Jan 17, 2022Updated 4 years ago
- Rust implementation of VG handle graph☆19Dec 18, 2023Updated 2 years ago
- A LaTeX package for drawing genetic construct pictograms using TikZ.☆11Jan 26, 2022Updated 4 years ago
- the we-flyin WFA-guided ultralong tiling sequence aligner☆10May 13, 2021Updated 4 years ago
- GeneNetwork (2nd generation)☆38Updated this week
- A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg☆11Mar 27, 2019Updated 7 years ago
- GFA parser in Rust☆30May 26, 2023Updated 2 years ago
- A simple C++17 header-only library for generating SVG plots☆10Mar 17, 2024Updated 2 years ago
- This is my personal Emacs configuration.☆12May 15, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Filter of Pairwise Alignement☆44Jan 31, 2022Updated 4 years ago
- nimble aligner that will map your reads to the references on a laptop☆11Jun 29, 2017Updated 8 years ago
- ☆11Feb 20, 2024Updated 2 years ago
- std::map/std::set implementation using the adaptive radix tree☆15Jul 14, 2021Updated 4 years ago
- A lightweight library for working with PAF (Pairwise mApping Format) files☆30May 3, 2022Updated 3 years ago
- Rust crate with bindings and interface to the SPOA library for generating consensus sequences.☆13Apr 16, 2019Updated 6 years ago
- Next Index to Query Kmer Intersection☆17Feb 1, 2023Updated 3 years ago
- convert PAF format to CHAIN format☆35May 14, 2025Updated 11 months ago
- ☆19May 10, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- Rust crate to Guix package definition☆17Nov 9, 2022Updated 3 years ago
- ☆18Feb 24, 2017Updated 9 years ago
- Refinements of the WFA alignment algorithm with better complexity☆26Mar 31, 2022Updated 4 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Dec 26, 2023Updated 2 years ago
- Ruby UCSC API: An API for the UCSC Genome Database☆19Jul 21, 2022Updated 3 years ago
- 📝 Easily convert Digital Object Identifier (DOI) and Uniform Resource Locator (URL) to BibTeX and DOI to plain text.☆38Apr 28, 2023Updated 2 years ago
- An experimental tool to estimate the similarity between all pairs of contigs☆40Apr 12, 2021Updated 5 years ago
- ☆30Mar 27, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Introduction to Workflows with Common Workflow Language☆11Apr 17, 2024Updated last year
- GRAph-based Finding of Individual Motif Occurrences☆31Aug 29, 2024Updated last year
- Rust bindings to the wavefront algorithm C implementation☆17Sep 20, 2022Updated 3 years ago
- Emacs pcomplete for git☆10Jan 21, 2017Updated 9 years ago
- more than 80 gpl3+ licensed guile scheme libraries☆20Nov 22, 2025Updated 4 months ago
- the pangenome graph evaluator☆29Apr 12, 2021Updated 5 years ago
- Classify sequencing reads using MinHash.☆48Apr 6, 2020Updated 6 years ago