EBIvariation / CMATLinks
ClinVar Mapping and Annotation Toolkit
☆20Updated last week
Alternatives and similar repositories for CMAT
Users that are interested in CMAT are comparing it to the libraries listed below
Sorting:
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆90Updated 3 months ago
- ☆72Updated 2 months ago
- ☆88Updated 2 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- Analysis pipeline for the GUIDE-seq assay.☆29Updated 6 months ago
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆26Updated 3 years ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆69Updated last year
- Example genomics data for tool developers☆117Updated last year
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆50Updated 3 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 10 months ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- visual analysis of your VCF files☆39Updated 3 years ago
- Extract data quickly from Juicebox via straw☆69Updated 10 months ago
- Parsing tools for GTF (gene transfer format) files☆125Updated 11 months ago
- Tools for making plots of genomic datasets in a genome-browser-like format☆33Updated last year
- Pangolin is a deep-learning method for predicting splice site strengths.☆85Updated last year
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications☆28Updated 2 years ago
- A guide to running MaxQuant in Linux☆35Updated 6 years ago
- Project Manager for NGS data analysis☆31Updated 2 weeks ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Updated 9 years ago
- gatk4 RNA variant calling pipeline☆59Updated 2 weeks ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Interactive tutorials for using scikit-bio in biological research☆62Updated 5 months ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆51Updated 2 months ago
- Fast and flexible ORF finder☆78Updated 4 years ago
- Python biomart API☆69Updated 2 years ago
- coding exercise using TCGA immune infiltration data☆46Updated 2 years ago