EBIvariation / CMATLinks
ClinVar Mapping and Annotation Toolkit
☆20Updated 2 weeks ago
Alternatives and similar repositories for CMAT
Users that are interested in CMAT are comparing it to the libraries listed below
Sorting:
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆25Updated 3 years ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- ☆65Updated 6 months ago
- Analysis pipeline for the GUIDE-seq assay.☆27Updated 3 weeks ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated 3 weeks ago
- visual analysis of your VCF files☆36Updated 2 years ago
- ☆72Updated 2 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆30Updated last year
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆48Updated 2 years ago
- Parsing tools for GTF (gene transfer format) files☆121Updated 6 months ago
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆66Updated 2 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆93Updated 3 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆43Updated 9 years ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆70Updated 8 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆85Updated 3 months ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Updated 5 years ago
- gatk4 RNA variant calling pipeline☆52Updated this week
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆67Updated 3 weeks ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆56Updated 2 months ago
- Making bioinformatics fun again☆75Updated 3 months ago
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆32Updated last year
- Example genomics data for tool developers☆115Updated last year
- coding exercise using TCGA immune infiltration data☆46Updated last year
- Parse GFF3 into Pandas dataframes☆30Updated last year
- ☆36Updated 6 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆51Updated 3 months ago
- ☆39Updated last month
- Interactive multiscale visualization for structural variation in human genomes☆70Updated 3 weeks ago