battle-lab / twn_tsnLinks
Transcriptome-wide network
☆16Updated 6 years ago
Alternatives and similar repositories for twn_tsn
Users that are interested in twn_tsn are comparing it to the libraries listed below
Sorting:
- ☆17Updated last year
- Workflow for Sequenza, cellularity and ploidy☆20Updated last month
- ☆23Updated 4 years ago
- a set of NGS pipelines☆24Updated 3 weeks ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 5 years ago
- ☆33Updated 10 months ago
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆19Updated last year
- Filter and prioritize fusion calls☆20Updated last year
- A collection of modules to process and analyze IMGT-HLA sequences.☆28Updated 2 years ago
- DriverPower☆26Updated 8 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆10Updated 4 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the…☆23Updated 2 years ago
- ☆21Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- A toolkit for working with ATAC-seq data.☆24Updated last year
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆19Updated 2 weeks ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Updated 5 years ago
- ☆15Updated 2 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Updated last year
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆35Updated 10 months ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year