Alternatives and similar repositories for scripts-general-use:

Users that are interested in scripts-general-use are comparing it to the libraries listed below

• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆20Updated 7 years ago
• knausb / vcfR_documentation
  Documentation for vcfR
  ☆11Updated 2 years ago
• js2264 / tidyCoverage
  ☆21Updated 5 months ago
• NBISweden / workshop-mlbiostatistics
  ☆15Updated 2 weeks ago
• bartongroup / RATS
  Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
  ☆32Updated 2 years ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆24Updated 11 months ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated this week
• bcbc-group / CyVerese_SNP_calling_webinar
  ☆10Updated 4 years ago
• ssadedin / variant_calling_pipeline
  A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.
  ☆14Updated 11 years ago
• drisso / peixoto2015_tutorial
  Tutorial to reproduce the analysis of Peixoto et al. (2015)
  ☆9Updated 9 years ago
• sschmeier / genomics
  Sphinx documentation source for a computational genomics tutorial.
  ☆33Updated 4 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆36Updated last month
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆23Updated 2 years ago
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆16Updated 2 years ago
• nathanhaigh / 2019_EMBL-ABR_Snakemake_webinar
  Scripts and Snakemake pipeline used in the EMBL-ABR webinar
  ☆13Updated 5 years ago
• friedue / course_RNA-seq2017
  ☆12Updated 7 years ago
• 123xiaochen / VCFshiny
  ☆29Updated 4 months ago
• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆28Updated last year
• BIMSBbioinfo / pigx_rnaseq
  Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
  ☆21Updated last month
• jokergoo / KeywordsEnrichment
  ☆32Updated last year
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆38Updated 5 months ago
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• IrinaVKuznetsova / CirGO
  ☆21Updated 8 months ago
• cxli233 / ggtraces
  A tidyverse and grammar of graphics powered line traces visualizer
  ☆28Updated 7 months ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 3 years ago
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆37Updated 2 years ago
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆27Updated 2 months ago
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated 2 weeks ago
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆28Updated last month