Updates to the synthetic contact matrices
☆39Sep 27, 2023Updated 2 years ago
Alternatives and similar repositories for synthetic-contact-matrices
Users that are interested in synthetic-contact-matrices are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Derive social mixing matrices from survey data.☆43Updated this week
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- Inferring high-resolution human mixing patterns for disease modeling☆48Dec 8, 2022Updated 3 years ago
- Workshop on hhh4 and the endemic-epidemic framework☆19Oct 13, 2022Updated 3 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆10Jul 11, 2025Updated 9 months ago
- Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri☆21Oct 1, 2025Updated 6 months ago
- Age-structured SEIR model for COVID-19 outbreak in Wuhan, China☆41Apr 6, 2020Updated 6 years ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 4 years ago
- Contemporary statistical inference for infectious disease models using Stan☆16Mar 3, 2019Updated 7 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Dec 9, 2023Updated 2 years ago
- ☆23Jan 30, 2021Updated 5 years ago
- Model and preprint estimating impact of physical distancing measures☆15Aug 11, 2020Updated 5 years ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆21Apr 26, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- FluSight Forecast Submissions☆20Apr 22, 2024Updated last year
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Feb 2, 2023Updated 3 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Aug 31, 2022Updated 3 years ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17May 9, 2024Updated last year
- Analysis of COVID-19 transmission using cluster size distribution☆11Jun 14, 2022Updated 3 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆134Apr 9, 2026Updated last week
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated last month
- ☆29Jun 16, 2025Updated 10 months ago
- ☆27Feb 25, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Bayesian model for time-series count data with weekend effects and a lagged reporting process☆10Mar 7, 2022Updated 4 years ago
- ☆16Aug 18, 2021Updated 4 years ago
- Mathematical modelling of different strategies to reopen schools in the UK post COVID-19☆14Apr 21, 2022Updated 3 years ago
- ☆20Apr 9, 2021Updated 5 years ago
- epidemia package☆49Jun 24, 2022Updated 3 years ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39May 4, 2020Updated 5 years ago
- R-package for building and fitting Bayesian ODE models in Stan☆30Sep 13, 2024Updated last year
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Nov 10, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Course on nowcasting and forecasting of infectious disease dynamics☆23Mar 2, 2026Updated last month
- ☆11Aug 11, 2020Updated 5 years ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆14Apr 6, 2023Updated 3 years ago
- A fast C++ API for simulating the spread of epidemics on contact networks.☆41Nov 6, 2023Updated 2 years ago
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆16Jul 11, 2019Updated 6 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 6 months ago
- ☆17Feb 23, 2021Updated 5 years ago