Alternatives and similar repositories for abc_R

Users that are interested in abc_R are comparing it to the libraries listed below

• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆39Updated 2 years ago
• covid19br / nowcaster
  Repository to the R package nowcaster, nowcasting with INLA
  ☆22Updated 3 months ago
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆20Updated 3 months ago
• gasparrini / ItalyCOVIDdeath
  Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic
  ☆17Updated 10 months ago
• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆22Updated 2 months ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆17Updated 3 weeks ago
• gkonstantinoudis / ExcessDeathsCOVID
  Excess deaths due to COVID-19 pandemic in 2020
  ☆11Updated 3 years ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated 2 years ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆42Updated last week
• kbubar / vaccine_prioritization
  ☆17Updated 4 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆49Updated 3 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆32Updated 4 months ago
• epiforecasts / scoringutils
  Utilities for Scoring and Assessing Predictions
  ☆60Updated last week
• covid-19-Re / estimateR
  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
  ☆11Updated last year
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated 2 years ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆49Updated last year
• nfidd / nfidd
  Course on nowcasting and forecasting of infectious disease dynamics
  ☆22Updated last week
• ryantibs / quantgen
  Tools for generalized quantile modeling
  ☆15Updated 3 years ago
• biouea / covidhm
  ☆23Updated 4 years ago
• athowes / thesis
  Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)
  ☆16Updated last month
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆28Updated 4 years ago
• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆47Updated 3 years ago
• lsbastos / Delay
  Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.
  ☆16Updated 6 years ago
• objornstad / epimdr2
  ☆20Updated 2 years ago
• skdeshpande91 / flexBART
  Towards a more flexible BART
  ☆23Updated this week
• cmmid / covid-age
  Analysis code and data for COVID-19 age-specific clinical fraction
  ☆24Updated 5 years ago
• mkln / meshed
  Meshed GP for Bayesian spatial big data regression
  ☆14Updated 3 months ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 3 years ago