Alternatives and similar repositories for spatiotemporal-graph-kernels

Users that are interested in spatiotemporal-graph-kernels are comparing it to the libraries listed below

• elizavetasemenova / PriorVAE
  Code of PriorVAE: encoding spatial priors with variational autoencoders
  ☆12Updated 2 years ago
• MLGlobalHealth / pi-vae
  Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space
  ☆14Updated 2 years ago
• onnela-lab / gptools
  Gaussian processes on graphs and lattices in Stan.
  ☆18Updated 6 months ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated last month
• jtimonen / odemodeling
  R-package for building and fitting Bayesian ODE models in Stan
  ☆29Updated last year
• elizavetasemenova / prob-epi
  Course materials of "Bayesian Modelling and Probabilistic Programming with Numpyro, and Deep Generative Surrogates for Epidemiology"
  ☆70Updated 7 months ago
• SamuelBrand1 / MonkeypoxUK
  Some code for monkeypox
  ☆10Updated 2 years ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated last year
• alan-turing-institute / jbc-turing-rss-nowcasting
  A Bayesian model for time-series count data with weekend effects and a lagged reporting process
  ☆10Updated 3 years ago
• MrinankSharma / COVID19NPISecondWave
  ☆15Updated 4 years ago
• LuZhangstat / Pathfinder
  ☆24Updated 2 years ago
• akira-endo / Intro-PMCMC
  Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.
  ☆12Updated 3 years ago
• edfong / conformal_bayes
  Conformal Bayes with importance sampling
  ☆22Updated 3 years ago
• ryantibs / quantgen
  Tools for generalized quantile modeling
  ☆15Updated 3 years ago
• skdeshpande91 / flexBART
  Towards a more flexible BART
  ☆22Updated last month
• elizavetasemenova / gp_turing
  ☆15Updated 4 years ago
• CDCgov / measles-model-chicago-2024
  Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…
  ☆15Updated 11 months ago
• nicsteyn2 / NZWastewaterModelling
  ☆10Updated last week
• bernarditaried / ZigZag-Sampling-Tutorial
  This tutorial is a basic guide to understanding the Zig-Zag Sampling method. This document is released with the aim of diffusion and shar…
  ☆21Updated 6 years ago
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• cmu-delphi / epiprocess
  Tools for basic signal processing in epidemiology
  ☆13Updated last week
• mattiasvillani / BayesianLearningBook
  Home for the book-in-progress 'Bayesian Learning'
  ☆28Updated last week
• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆20Updated last week
• athowes / thesis
  Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)
  ☆16Updated last month
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated last year
• BDI-pathogens / EpiLine
  Bayesian Modelling in Epidemiology Case Line Lists
  ☆14Updated this week
• dylanhmorris / optimal-sir-intervention
  Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"
  ☆11Updated 3 years ago
• abhiagwl / vistan
  A simple library to run variational inference on Stan models.
  ☆33Updated 2 years ago
• jcblemai / influpaint
  Influpaint : Inpainting denoising diffusion probabilistic models for infectious disease (such as influenza) forecasting
  ☆13Updated 2 weeks ago
• EpiAware / CensoredDistributions.jl
  Additional censored event tools for Distributions.jl
  ☆13Updated last week