alan-turing-institute / jbc-turing-rss-nowcastingLinks
A Bayesian model for time-series count data with weekend effects and a lagged reporting process
☆10Updated 3 years ago
Alternatives and similar repositories for jbc-turing-rss-nowcasting
Users that are interested in jbc-turing-rss-nowcasting are comparing it to the libraries listed below
Sorting:
- An R package for Bayes Linear emulation and history matching.☆16Updated last month
- ☆15Updated 4 years ago
- ☆15Updated 4 years ago
- Code of PriorVAE: encoding spatial priors with variational autoencoders☆12Updated 2 years ago
- Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.☆21Updated this week
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆12Updated 3 years ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated last year
- Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space☆14Updated 2 years ago
- Beamer presentation introducing Julia☆13Updated 7 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Updated 3 years ago
- Easily combine predictions from multiple Bayesian models using techniques including (pseudo) Bayesian model averaging, hierarchical stack…☆36Updated 10 months ago
- Tools for generalized quantile modeling☆15Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Updated this week
- Real time estimation of epidemic Effective Reproduction Number for Luxembourg☆12Updated 2 years ago
- The official implementation of Non-separable Spatio-temporal Graph Kernels via SPDEs.☆16Updated 3 years ago
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Updated 3 years ago
- Infectious disease model library and utilities☆14Updated 3 years ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Updated last year
- Gaussian processes on graphs and lattices in Stan.☆18Updated 6 months ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆10Updated 4 years ago
- Fit, evaluate, and visualise generalised additive models (GAMs) in native Julia☆33Updated last year
- Repository to the R package nowcaster, nowcasting with INLA☆22Updated 2 weeks ago
- Some code for monkeypox☆10Updated 2 years ago
- Julia interface to quarto-cli☆16Updated 4 years ago
- Web dashboard to visualize COVID-19 serosurveillance efforts☆12Updated this week
- Course materials of "Bayesian Modelling and Probabilistic Programming with Numpyro, and Deep Generative Surrogates for Epidemiology"☆70Updated 7 months ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated last month
- Julia package that wraps the R tidytable package (tidyverse syntax with the speed of data.table)☆24Updated 2 years ago
- ☆10Updated last week