Alternatives and similar repositories for jbc-turing-rss-nowcasting

Users that are interested in jbc-turing-rss-nowcasting are comparing it to the libraries listed below

• MrinankSharma / COVID19NPISecondWave
  ☆15Updated 4 years ago
• elizavetasemenova / PriorVAE
  Code of PriorVAE: encoding spatial priors with variational autoencoders
  ☆12Updated 2 years ago
• onnela-lab / gptools
  Gaussian processes on graphs and lattices in Stan.
  ☆18Updated 7 months ago
• elizavetasemenova / gp_turing
  ☆15Updated 4 years ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated 2 months ago
• akira-endo / Intro-PMCMC
  Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.
  ☆12Updated 3 years ago
• CDCgov / PyRenew
  Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.
  ☆22Updated this week
• ryantibs / quantgen
  Tools for generalized quantile modeling
  ☆15Updated 3 years ago
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• MLGlobalHealth / pi-vae
  Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space
  ☆14Updated 2 years ago
• LedgerInvesting / bayesblend
  Easily combine predictions from multiple Bayesian models using techniques including (pseudo) Bayesian model averaging, hierarchical stack…
  ☆37Updated 11 months ago
• cboettig / bad-forecast-good-decision
  Utility provides a more meaningful measure of forecast skill than goodness-of-fit
  ☆18Updated 3 years ago
• covid-19-Re / estimateR
  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
  ☆11Updated last year
• seabbs / idmodelr
  Infectious disease model library and utilities
  ☆14Updated 3 years ago
• AaltoPML / spatiotemporal-graph-kernels
  The official implementation of Non-separable Spatio-temporal Graph Kernels via SPDEs.
  ☆16Updated 3 years ago
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated last year
• ropensci / dynamite
  Bayesian Inference of Complex Panel Data
  ☆35Updated 4 months ago
• nickeubank / JuliaOverview
  Beamer presentation introducing Julia
  ☆13Updated 7 years ago
• obrienjoey / ireland_covid_modelling
  Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…
  ☆10Updated 4 years ago
• ResearchLuxembourg / restimator
  Real time estimation of epidemic Effective Reproduction Number for Luxembourg
  ☆12Updated 3 years ago
• kdpsingh / TidyTable.jl
  Julia package that wraps the R tidytable package (tidyverse syntax with the speed of data.table)
  ☆24Updated 2 years ago
• mrc-ide / mcstate
  Monte-Carlo State Space Models
  ☆19Updated last year
• serotracker / sero-can-webapp
  Web dashboard to visualize COVID-19 serosurveillance efforts
  ☆12Updated 3 weeks ago
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆20Updated last month
• elizavetasemenova / prob-epi
  Course materials of "Bayesian Modelling and Probabilistic Programming with Numpyro, and Deep Generative Surrogates for Epidemiology"
  ☆70Updated 8 months ago
• covid19br / nowcaster
  Repository to the R package nowcaster, nowcasting with INLA
  ☆22Updated last month
• BDI-pathogens / EpiLine
  Bayesian Modelling in Epidemiology Case Line Lists
  ☆14Updated 2 weeks ago
• avehtari / casestudies
  ☆30Updated last year
• flatironinstitute / mcmc-monitor
  Monitor MCMC runs in the browser
  ☆37Updated last year
• shedding-hub / shedding-hub
  Data and statistical models for biomarker shedding.
  ☆14Updated this week